| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1587 |
|---|
| Symbol | |
|---|
| ID | 4842651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1848189 |
|---|
| End bp | 1850276 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118803 |
|---|
| Product | outer membrane protein precursor MtrB |
|---|
| Protein accession | YP_001049970 |
|---|
| Protein GI | 126173821 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.14869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA AACTCAATTT GATCACTCTT GCGTTACTGG CAAACACAGG TTTTGCGATA
GCGGCCGATG GGTATGGCTT GGCCAATGCC AATACCGAAA AAGTCAAAAT GTCCGCATGG
AGCTGTAAAG GCTGCGTCGT TGAAACGGGC ACATCGGGCA CTGTGGGTGT CGGCGTAGGT
TATAACAGTG AAGAGGACAT TCGCTCGGCG AATGCCTTTG GGACTTCAAA CGAAGTCGCA
GGGAAATTGG ATGCTGATGT CACCTTTCGC GGTGAAAAAG GCTATCGTGC CAGCGTTGAA
GCCTATCAAC TGGGCATGGA TGGCGGCCGC TTAGAGGTGA ATGCCGGCAA ACAAGGCCAG
TACAATGTCA ATGTGAACTA TCGCCAGATT GCCACTTACA ACAGCAACAG TGCCTTAACG
CCCTACTCGG GTGTGGGCAG CGATAATTTA ACGCTGCCAG ACAACTGGGT GACGGCGGGT
TCAAGCAGCC AAATGCCATT ACTGATGGAC AGCCTGAACT CCTTAGAACT GTCGCTCAAA
CGTGAGCGCA CTGGGCTAGG TTTTGATTAT CAAGGTGAAT CGCTGTGGAG CACACATGTG
AGCTACATGC GTGAAGAAAA AACCGGCTTG AAAAAAGCAT CTGGTGGATT CTTCAACCAA
TCTATGATGT TAGCCGAGCC TGTCGATTAC ACCACTGACT CCATTGAAGC GGGCATCAAG
CTTAAAGGCG ACAACTGGTT CACTGCACTT AACTACAATG GCTCGATTTT TAAGAACGAG
TACAACCAGT TAAATTTTGA CAGTGCGTTT AATCCAACCT TTGGCGCACA AACCACGGGC
ACACTCGCCC TTGATCCAGA CAATCAGTCA CACACTGTGT CGTTAATGGG CCAATACAAC
GACAGTACCA ATGTGCTATC GGCTCGCTTG CTTACCGGAC AAATGAGTCA AGACCAAGCG
TTAGTGACTT CAGGTTATGG TTATCAAGTG CCAACTGAAG CCCTTGATGC CAAGGTCGAC
CTTATCGGTT TGAACTTAAA AGTGGTCAGC AAAGTCACCA ACTCACTGCG CTTAAGTGGT
AGCTACGACT ATAACGACCG CGATAACAAT ACGCAGATTG AAGAGTGGAC CCAAGTCAGC
ATCAACAATG TCAACGGTAA GGTGGCCTAT AACACCCCTT ACGATAACAC TAGCCAACGC
TTCAAAGTGG CGGCGGATTA TCGTATTGCC CGCGGCATGA AACTCGATGG CGGCTATGAC
TTCAGACGTG ACGAACGTAA TTATCAAGAC CGTGAAACCA CGGATGAGAA CACGGTTTGG
GCGCGTTTCA GAGTCAACAG CTTCGAAACT TGGGATATGT GGGTTAAGGG CAGTTACGGT
CAACGTGACG GCTCGGAATA TCAAGCCTCT GAATGGACAT CGTCTGAAAC CAACAGCCTG
TTGCGTAAGT ACAATCTGGC GAACCGTGAC AGAACCCAAG TGGAAGCGCG AGTCACTCAT
TCGCCTATCG AAAGCCTGAC CATAGATTTC GGTGCCCGTT ACGCATTAGA TGACTACACA
GATACTGTCA TCGGTTTAAC TGAGTCAAAA GACACCAGTT ATGATGCCAA CATCAGCTAC
ATGATCACCG ATGATTTACT GGCGAACGCC TTCTACAACT ATCAAATCAT TGAATCTGAA
CAAGCGGGAT GCAGCAACTA CAGCACCCCA ACCTGGACAG GTTTCATCGA AGATAAAGTC
GATGTTGTCG GCGCTGGCAT TAGCTACAAC AACTTACTTG AGAACAAGTT ACGCATGGGA
CTGGATTACA CCTATTCAGA CTCCAACAGT AACACCCAAG TTAGACAAGG TATCACAGGC
GACTACGGCG ATTATTTTGC CAAAGTACAC AACATTAACT TATACGCTCA ATATCAAGCC
ACCGAGAAAA TGGCGCTGCG CTTCGATTAT AAAATTGAGA ACTATAAGGA CAATGACGCT
GCCAATGATA TCGCCGTCAA TGGGATCTGG AACGTCGTAG GTTTTGGTGA TAATAGCCAT
GACTACACAG CGCAGATGAT CATGTTAAGC ATGAGCTACA AGATCTAA
|
|---|
| Protein sequence | MKFKLNLITL ALLANTGFAI AADGYGLANA NTEKVKMSAW SCKGCVVETG TSGTVGVGVG
YNSEEDIRSA NAFGTSNEVA GKLDADVTFR GEKGYRASVE AYQLGMDGGR LEVNAGKQGQ
YNVNVNYRQI ATYNSNSALT PYSGVGSDNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK
RERTGLGFDY QGESLWSTHV SYMREEKTGL KKASGGFFNQ SMMLAEPVDY TTDSIEAGIK
LKGDNWFTAL NYNGSIFKNE YNQLNFDSAF NPTFGAQTTG TLALDPDNQS HTVSLMGQYN
DSTNVLSARL LTGQMSQDQA LVTSGYGYQV PTEALDAKVD LIGLNLKVVS KVTNSLRLSG
SYDYNDRDNN TQIEEWTQVS INNVNGKVAY NTPYDNTSQR FKVAADYRIA RGMKLDGGYD
FRRDERNYQD RETTDENTVW ARFRVNSFET WDMWVKGSYG QRDGSEYQAS EWTSSETNSL
LRKYNLANRD RTQVEARVTH SPIESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY
MITDDLLANA FYNYQIIESE QAGCSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRMG
LDYTYSDSNS NTQVRQGITG DYGDYFAKVH NINLYAQYQA TEKMALRFDY KIENYKDNDA
ANDIAVNGIW NVVGFGDNSH DYTAQMIMLS MSYKI
|
|---|
| |