| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4119 |
|---|
| Symbol | |
|---|
| ID | 7088442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4887566 |
|---|
| End bp | 4888543 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462998 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_002360013 |
|---|
| Protein GI | 217975262 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTAA CTTGGGTTCT ACGCTTAACC TTAGTCTTTA CCCTATTGGT GATTTTAATG
GGTGCTTACA CTCGCCTATC GGATGCGGGT CTAGGCTGCC CAGATTGGCC GGGTTGCTAC
GGCCATATCA AGGTGCCAAC CCAAGACCAT GAAATCGCCC ATGCACAAAC CATCTTCCCA
GATCACGATA TCCATCCTGA GAAAGCTTGG CTGGAGATGA TCCACAGATA TATCGCCGGC
GGACTTGGCT TACTAGTATT GTTCATCTTA GTGCTGTGTT TGAAAACGCC GGAAGCGCCG
AAAAAATTGC CGCTCATCAT AGTGCTGCTG ATCCTCTTTC AAGCCGCACT CGGCATGTGG
ACAGTGACGA TGAAACTCAT GCCCATAGTG GTGATGTCGC ATCTTATTGG TGGCTTCAGC
CTGATTTCAC TGCTGTTACT CCTCTATCTG CGAACCCGAC CACGGCGGAT CTTTAATAGC
GAAACCTATG CCCGCAATCT GGCACCGCTG GCACTGGTGA GCCTGTTCGT GCTTGTGGGT
CAGATTATGC TGGGCGCTTG GACATCATCT AATTATGCGG CGCTCGCCTG CACCGCTTTA
CCCATTTGCG AAGGCAACTG GGTGGATAAT TTGGCAATAG CGGAAGCTTT TTCGCCGTTT
CAAGGCCAAC ACCACAGTTT CGAATTTGGA GTGCTCGATT ACCCAGCCCG TATGACTATC
CACATCGCCC ACCGAATTGG CGCTATCGTT ACCGCGAGTT TATTACTCGT GCTCGCCTAT
CGATTATTTG TTGGCGCAGC TGGGATGAGG GCCTTAAGCC TCTTATTGGT AGGGTTAGTG
ATCCTACAAG TGAGCTTAGG TATTTCTAAC GTAGTGATGC ATTTACCACT CGGCATTGCC
GTGTCTCACA ATGGCGGGGC GGCATTACTG CTGCTGACCT TAGTCGCAAT CAACTATTTT
TTATGGCGCA AAGCATAA
|
|---|
| Protein sequence | MQLTWVLRLT LVFTLLVILM GAYTRLSDAG LGCPDWPGCY GHIKVPTQDH EIAHAQTIFP
DHDIHPEKAW LEMIHRYIAG GLGLLVLFIL VLCLKTPEAP KKLPLIIVLL ILFQAALGMW
TVTMKLMPIV VMSHLIGGFS LISLLLLLYL RTRPRRIFNS ETYARNLAPL ALVSLFVLVG
QIMLGAWTSS NYAALACTAL PICEGNWVDN LAIAEAFSPF QGQHHSFEFG VLDYPARMTI
HIAHRIGAIV TASLLLVLAY RLFVGAAGMR ALSLLLVGLV ILQVSLGISN VVMHLPLGIA
VSHNGGAALL LLTLVAINYF LWRKA
|
|---|
| |