Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3689 |
Symbol | |
ID | 7089623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4381503 |
End bp | 4382282 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643462569 |
Product | Sel1 domain protein repeat-containing protein |
Protein accession | YP_002359590 |
Protein GI | 217974839 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.292341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATACA GATTATGGGT TTTAGGTGCA GGTTTAAGCT TAACGATTGG GCTGAGCTCT GCGGCGCACG CATTTTCTAT CCCGCAGCCT GCTGCCGAAC TCGCGGCCAG TAAGTTTGTG CACATTCAGG TGACGGCAGA GCAAGGCGAC GCCGATGCCC AATTTTTGCT GGGATTAATG TACCTTTCTG GGCGTTTTGT GGTGCAAGAA GTGCCCTCTG GTTTGCACTG GATTTCACTT GCCGCCGAGC AGCAACATGA AAAAGCGCAG CAAACCTTAG CCGACCTGTC TTTTGAAGGC CAATTGATCA AGCGTGACTT ATCCGTGGCC GAGCATTGGT ATCGAGCCTT GAGTGAGCAG GGAAGTCGTT GGGCACAATT CCGTTTAGGC TTTATTTATG CCTCTGGCGG CGATGGCGTG CAACGCAACT GTGGTAAAGC GGTCGAGCAA TTTTCCCAAG TGGGTGATGA TGTTGCCTTA GGTAATGTGG CGTGGATTTT AGCGACTTGC CCAGAAGCTG AGTATCGCGA TGGCAATAAA GCGGTCGAGT TATCCTTAAA GTTGCTCAAA GTGAATGAAA ACGACCCGAC AAATTTAGAT AATCTGGCTG CGGCTTATGC CGAAGTCGGC GATTTTGGTG CGGCAATTTC GACGCAGCAA AAAGCAATTG AAGCGTTAAA GATGAGCGCC GAAATGACTA AGACAGATGA ATTTATGCAG CGTTTACAAA CTTACGAGCA AAAGCGTGCG TATCGCGAAA CCTTACGTTT ACTCGAATAA
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Protein sequence | MKYRLWVLGA GLSLTIGLSS AAHAFSIPQP AAELAASKFV HIQVTAEQGD ADAQFLLGLM YLSGRFVVQE VPSGLHWISL AAEQQHEKAQ QTLADLSFEG QLIKRDLSVA EHWYRALSEQ GSRWAQFRLG FIYASGGDGV QRNCGKAVEQ FSQVGDDVAL GNVAWILATC PEAEYRDGNK AVELSLKLLK VNENDPTNLD NLAAAYAEVG DFGAAISTQQ KAIEALKMSA EMTKTDEFMQ RLQTYEQKRA YRETLRLLE
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