| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3341 |
|---|
| Symbol | |
|---|
| ID | 7087167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 3964401 |
|---|
| End bp | 3964838 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643462227 |
|---|
| Product | Biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_002359248 |
|---|
| Protein GI | 217974497 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00402112 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGTG CAGATGCATC ACCGCGCTCG CAGGCAGGCA TTGCTTCGCC TGAGCAGCTT
CCGAGCCTAG ATTTAACCGC GTTAATCGAC ATTATTTTTA TCGTGTTGGT ATTTCTACTG
CTGACGGCAA ACACCCAACT ACTCAGCTTG CCGGTAGATG TGCCGCAAAG CCCAAGTTCG
GCCATCACTG CAATCGACAA TAAGCCAACG ATTGCCATCA ATATCATGGC GACAGCGCCT
TATTGGGCAA TCGATAGTGA GACATTTGAT GATTTAGCGA CTTTTACCGC CGCGTTTACC
GAACATTTTA AGACTATGCC AGAGGCGACC GTGATTATTG CCGCCGATAA GGCCGCGCCG
GTGGAGCCCT TGATGCAACT GCTCGCGCTG TTGCAGACGC AGTCCATTAG TCAGACCCAA
ATCTTGATGG AGCATTAG
|
|---|
| Protein sequence | MISADASPRS QAGIASPEQL PSLDLTALID IIFIVLVFLL LTANTQLLSL PVDVPQSPSS
AITAIDNKPT IAINIMATAP YWAIDSETFD DLATFTAAFT EHFKTMPEAT VIIAADKAAP
VEPLMQLLAL LQTQSISQTQ ILMEH
|
|---|
| |