| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2911 |
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| Symbol | |
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| ID | 7089480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3422299 |
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| End bp | 3423162 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643461796 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002358820 |
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| Protein GI | 217974069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.131097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.387721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG ATGATATCTG GCTTGAAACG CCTGAAAATG CACTGAATGC ATCCCAAGAG
GATGATTCAG AAGCGCAGGC GCCTGAGATT GAAATTCTTT ATGAAGATGA TCACTTAGTG
GTAATTCATA AACCTGCAGG CTTATTGGTC CACCGCAGTT ATTTAGCGCG TCGGGAGCGA
TTTTTTGCCA TGCAGTTGAC CCGCGACTTA GTGGGCTGTC ATGTGTTCCC TGTACATCGT
CTCGACAGGC CGACATCTGG CGTGCTCTTG TTTGCCAAGA GTAGTGAAGT GGCCAATGCA
CTGTGTGAGC AATTTGCCTC CCATACGATT GAAAAACAAT ATTTGGCTTT AGTGCGCGGT
AATATGCATG AGAGCGGTAT TTTAGACTAT GCGCTTAAGG TTGAGTTAGA TGAATTAGGC
GATAAGAATG CCGATCCTAA CAAAGCGGCG CAGGAGGCTG TGACGGCTTA TGAGCCATTA
CTCAATACTG AGATTCCGTA TCCGTCAGGC CGATATCCCA CGAGCCGATT TGCACTGGTA
CGCTTGAGCC CTAAAACGGG GCGTAAGCAT CAGCTCAGAA GACATATGGC GCATTTACGT
CACCCTATTG TCGGTGATAC CACCCATGGC GACGGTAAGC AAAATGCGTT TTTCCGCGAG
CATTTTGGCA TTAATCGCCT GTGGCTTATC GCGAAAAAGC TCAGCTTCAC CCATCCTGTC
ACTCAAGTTC GGCTCAGCAT AGAAACCGAG CTCGAGCCTG AGTGGGAAAC CGTGTTTGCT
GAGCTAGGTT GGGACGAGGC GATCTTAAGT CAACAGGCTG AGTTGTTAAT CGCCACGGAT
GAAATACCAG CTGGAAATGC GTAA
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| Protein sequence | MNQDDIWLET PENALNASQE DDSEAQAPEI EILYEDDHLV VIHKPAGLLV HRSYLARRER
FFAMQLTRDL VGCHVFPVHR LDRPTSGVLL FAKSSEVANA LCEQFASHTI EKQYLALVRG
NMHESGILDY ALKVELDELG DKNADPNKAA QEAVTAYEPL LNTEIPYPSG RYPTSRFALV
RLSPKTGRKH QLRRHMAHLR HPIVGDTTHG DGKQNAFFRE HFGINRLWLI AKKLSFTHPV
TQVRLSIETE LEPEWETVFA ELGWDEAILS QQAELLIATD EIPAGNA
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