Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0570 |
Symbol | |
ID | 7089301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 654192 |
End bp | 655250 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643459497 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002356527 |
Protein GI | 217971776 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGG ATCAACAGTT TGCCCGTTTA GTAAAATTCG CCATGTTCGG CTTTGTGATG GTTTTTGGCT ATTTTATGCT CGCCGATACT ATGATGCCAT TAACGCCGCA AGCTATGGCG ACGCGTGTGG TGACTAAGGT CACGCCGCAG ATCAGCGGCA AAATTCAGAC CATAGCCGTG ACGAACAACC AAGCGGTTGC CAAGGGCGAT TTGTTGTTTC AAGTCGATCC CGCGCCCTAT GAGTTAGCGG TATCTCAAGC TAAATTAGCC TTAGAGCAAG CCCGCCAAGA CAATGCCGAA TTAGATGCCT CGTTGCTTGC CGCGAAGGCC GACGTCAATG CCAACAAAAC CACCTCACAA CAGAAACGCA GCGAAGCTAA GCGCCTCGAT GCTCTGTATG TCACCCATGG TGTATCGCAG CAGCAAAGGG ATCAGGCCGA TAGTGATGCC GCCGCTGCGG AAGCAAATTT GCTCGCCGCC AATGCGCGTT TAGAAAAACT TAAGGTGAGC CGTGGCAGTT ATGGCGAAGA GAATCTTAAG GTGCGTCAGG CACAAAATCA TCTTGCCCAA GCTGAGCTCA ATTTGTCTTA CACCCAAATC CATGCCGATC AGGACGGGAT AGTGACTAAC CTGCAGTTAG AAGTCGGGAG TTTTGCGACT GTGGGGCAAC CTCTGTTAGC CGTGGTATCG GATAAGATTG ATATTATTGC TGATTTTCGT GAAAAGAGTC TGCGTGGCGT CAATGCTTCA TCGACCGCTT TGATTGCGTT TGATGGCGAA CCCGGCCGTT TGTATCGGGC GACGGTGAGC AGTGTCGATG CGGGCGTGAG TGCGGGGCAA TTCGATGCCA ATGGCCGTTT AGCGGCGCCG CAGGAATCTG ATCGTTGGGT GCGTGATGCC CAAAGATTGA GACTGCATTT GGAGTTAGAT GGGATGGCGA TGAACAGCTT GCCAGCCGGT GCGCGCGCGA CCGTGCAACT GCTGCCCGAG AATAGTCTGT TTAGTCTGCT GGCTAAAGTA CAGATTAAAG TCATTAGCCT GCTGCACTAT ATTTATTAG
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Protein sequence | MTPDQQFARL VKFAMFGFVM VFGYFMLADT MMPLTPQAMA TRVVTKVTPQ ISGKIQTIAV TNNQAVAKGD LLFQVDPAPY ELAVSQAKLA LEQARQDNAE LDASLLAAKA DVNANKTTSQ QKRSEAKRLD ALYVTHGVSQ QQRDQADSDA AAAEANLLAA NARLEKLKVS RGSYGEENLK VRQAQNHLAQ AELNLSYTQI HADQDGIVTN LQLEVGSFAT VGQPLLAVVS DKIDIIADFR EKSLRGVNAS STALIAFDGE PGRLYRATVS SVDAGVSAGQ FDANGRLAAP QESDRWVRDA QRLRLHLELD GMAMNSLPAG ARATVQLLPE NSLFSLLAKV QIKVISLLHY IY
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