Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4571 |
Symbol | |
ID | 5756405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009998 |
Strand | + |
Start bp | 53327 |
End bp | 53992 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290929 |
Product | integrase family protein |
Protein accession | YP_001556987 |
Protein GI | 160872980 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.624666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCG CTGACGCACT TACCCCCGCA GAAATAAACC GAGTCCTAAG AACGTGTGTT TTAATGCCCC ACAGTGAAGC TAAACGCTGC GCCTTGGTAT TATCACATGC TGCTATGCGC GTGACTGAGA TCGCTCTACT CAGAACGGAA CACGTTCTAT TTGCAAACGG CAAAATTAGG GATGAAATCC ACCTTCCCGC CAATATCTGT AAATTTTTAA AACCCCGCAC AGTTTGGCTT TCAAATCGCA CATCGAGGGC AATAATCCAA GAGTGGGTAA ATCATCGCTT AACCAAAAAA TGGGGTGTCT CTGGACGCTC CGAGTATCAG GGGTTGATCC CCGAATCACG TTTTCTGTAT ACCTTACGTG GCGCTCCATA CTCGATACAG CCGAAACCAA GGAAGCTCGA ATCAGGAGAG GTACGGGAGT ATTGGGCTTG CGACTCGCTA GAACAGGCTA TGCGTGAAAT TTATAAGAAA TGCGGCTTGC CCTCGGCATC GTCCCATAGT GGGCGTAAAT CGCTTTGTAC TAACGCTGTG ATCAGTGGTG TTGATATTGA ATCTGTTGCG CGAATCCTCG GCCATGCCAG CGCCGAAACA ACCATTGACT ATATTGTGAT TCAATCAAAG CGGATTGAAG AAATGTGCGG TCTTGATTGG GTTTGA
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Protein sequence | MSRADALTPA EINRVLRTCV LMPHSEAKRC ALVLSHAAMR VTEIALLRTE HVLFANGKIR DEIHLPANIC KFLKPRTVWL SNRTSRAIIQ EWVNHRLTKK WGVSGRSEYQ GLIPESRFLY TLRGAPYSIQ PKPRKLESGE VREYWACDSL EQAMREIYKK CGLPSASSHS GRKSLCTNAV ISGVDIESVA RILGHASAET TIDYIVIQSK RIEEMCGLDW V
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