Gene Sbal195_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3754 
Symbol 
ID5755568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4422787 
End bp4423326 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content46% 
IMG OID641290095 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001556174 
Protein GI160876858 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0473065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA AGATCATTCA TCAAGCAGAG TTTGAGTCCA ATCTAGGTTT GTATTGGTTG 
CTTTCAGGGG CCGCCTATTT CAGCCTCAGC ATAGTCGGCA TTCCCTTGTT ATTGCTTTGG
TTTCCAATCG GGCTGTGGGG AACTCGCCGC TATATTCGTA ATATGAGTGC CGAGCTCACC
AGTAATAAGT TGATTGTGCG CCGCGGAATA TTAACTCGTA CCGAAAATAC AGTGCCTTTG
GACAAAATTA CCGATATGGC ATTGATCCAA GGCCCAATTA TGCGCCTATT TGGTCTGCAT
AAACTCACGG TAGAAACCGC AGGGCAATCG GGCGCAGGCG CCTTGATAAG CTTAGTCGGC
ATAGTTGATG CGCCTCAATT TAGAACCCGC GTATTAGAAC AAAAAGAACG TCTTACTCAG
CGCCCACATC CAGCGAGTCC ATCTGTACAA CCTGATGATG CGTTATTACA AAACGTAGTC
GAGATGGTAG CAAGCCTAAA ACGAATTGAA GCCTTGCTCA GCCAAAAATT AAATAGATAA
 
Protein sequence
MEDKIIHQAE FESNLGLYWL LSGAAYFSLS IVGIPLLLLW FPIGLWGTRR YIRNMSAELT 
SNKLIVRRGI LTRTENTVPL DKITDMALIQ GPIMRLFGLH KLTVETAGQS GAGALISLVG
IVDAPQFRTR VLEQKERLTQ RPHPASPSVQ PDDALLQNVV EMVASLKRIE ALLSQKLNR