Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3564 |
Symbol | |
ID | 5755378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4188312 |
End bp | 4190366 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641289907 |
Product | TonB-dependent receptor |
Protein accession | YP_001555986 |
Protein GI | 160876670 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000148134 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAGTC GTTACTTCTC AGTATCACTC TGTGCAATGT CTGTATCTCT TGCCTGTTCT AGCACAACGT TCGCCGATGA TTTCCACAGT CAAATGCTTG AACTGAACCT GCTCAATGAC ACATTCCACT CAACTGCTGA CAGTTTAGCC TTAGGCCAGT TAACGGCTTT GACGGTTTTA CCTGCGGATC TTAACGGAAA TCCAGCAAGC ATTAGTATGC GCAGCGCGAG TCAAGGCGTG GCCGTATTGC AAGATAGAGT GTATTTCTCA CCTGCGCCTT ATTCTGCGCC GCAATTACAA CTATTGCCCA ATCTGCTGCA ACAACAGAGT GTCACCGTCA CGCCAATGGC GAATATGGCT GTTGGTGGGC AAGGGGCGTT TGGGGTGGTG AGTTATCAAA CCTTACCCGT GGCCGAACAA GCGGAAAACA GTAAAGTAAC GCTCGAAGGC AATACCGATG CCGATTACAG TGTCGATGTG AATTGGGGCG TGAAGCAAAA AGAATACGGC ATGATACTCG CGGTTAACTA CAGTGATGGT AGCTGCGCCG AGCACTTACT CAATGGCCAA GATACTGACC GCCAAACCAC TGATATCTTA TTTAAAATCA ATGCTGCGAG TTTATTAGGT GCCCGAAGTC CGCAGGTGAC TGAGTTTACC TATCAGTTCC TCGATGATGA TAGCTATCGC TCCCAACTCG GCTTAACACA GGCCGATTGG CAACAAGACC CGATGAGTTT GTATTCGACC ACGGCTGGAG ATAAGCACCA AGGGCGACAC CATAAGTATC AATTGTCGCA CCAAGTTGCG TTAAGTGGCG GGCATAAGGT CATCACGGAC TTTTATTATC AATCCTATTC GCAGCAATTA AATCAACTTA ATCAATTTGA TGGGCAAATG CTCGATACCC AGAGTTTAGC AGCGCTGGCC GCATTTGAAC GGCAGCCGAC AGTCGATGGT GTCGCGGTCG CTTCGTTACA ACAAGACAAT GATTTTAGCT CCTTTGGGGT ACAAACTGAG TCCGTGAATC AATATGGCGC CCATCAAATT AGTTTGAGTG CCCGTTACCA TACTGATAAA GCTGAGATGC ACCTTGGTGA ACAGCAAAGT CTATGGCAGC AGGACTTGAG TTTAGTGAGT GATGCGCCAG ATGCGCTGTT GGCTTATACC GATGATGCGA CTGCATTCAC CTCGGCCATC GATTCCTTGT TTAATTGGGA CGGATTGCAG CTCAAACTCG CGCTTGCCTA TGAAAAAGTG GACGTCAATC GCGAGATCAA TCTAGCCTAC GCCGGACTCG AAGCGGCGGA TTTTTCTGAC AGCGATTGGA TGCCACAACT TGGCGTTTCA TATCATGCTG GAGATTGGCG CTTTAGTACG GATATTCGAC GTTCATGGAC CGCCGCGAGT GCGGGGAATC TTGAGCAAGA GGCGCAAGTG TCACTGCAAT ATCAAGTCAG CGCCCAATAT GCCAGCGAGC ATTTTAGTGC TGACATCAAA ACCTACGTCC AAGATTTTGA TAATCTGCAT GTCAATTGCG ATGCGTATAC CCAATGTGCC GACAGCCGTT TGTGGGTTCA AGGCAATGTC GTGGATGTGC TGACCAAAGG GGTTGAGCTG AATCTTGGCT ATCAGTGGGA TCTGGGCAGT GTGCAGTTGC CTTTAGCATT AAATTATCAG TATTCGAATG CCGAGTATCA AACCAATAGC TGCAACGAAA TCCAGGGCTG CGTCGTGGCT GGCGATAGGG TGGCTTGGTT ACCCGAGCAG CAACTGCAGT TGAGTGCAGG GATGAAATAT GCCGAATATG AACTGAACGC GAATGTCTTT TATCAATCGG AGCGGGAAAT GGGCCAATTT GGCGCCGAAT TACAGCCTGT CGCTGCACAA TGGCGGGTAG ATTTAGCGGC GAATTATCAT TTTAACCGTC ACCATGAGAT TTATTTTCGG ATAGAAAACC TCTTAGATGA GACATTAGTC ACGACAGCAT CAAATAGCGG AATTCGATCG GAAAATGGAC GTATTAGCTA TTTAGGTTAT CAATGGCGCT TTTAA
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Protein sequence | MPSRYFSVSL CAMSVSLACS STTFADDFHS QMLELNLLND TFHSTADSLA LGQLTALTVL PADLNGNPAS ISMRSASQGV AVLQDRVYFS PAPYSAPQLQ LLPNLLQQQS VTVTPMANMA VGGQGAFGVV SYQTLPVAEQ AENSKVTLEG NTDADYSVDV NWGVKQKEYG MILAVNYSDG SCAEHLLNGQ DTDRQTTDIL FKINAASLLG ARSPQVTEFT YQFLDDDSYR SQLGLTQADW QQDPMSLYST TAGDKHQGRH HKYQLSHQVA LSGGHKVITD FYYQSYSQQL NQLNQFDGQM LDTQSLAALA AFERQPTVDG VAVASLQQDN DFSSFGVQTE SVNQYGAHQI SLSARYHTDK AEMHLGEQQS LWQQDLSLVS DAPDALLAYT DDATAFTSAI DSLFNWDGLQ LKLALAYEKV DVNREINLAY AGLEAADFSD SDWMPQLGVS YHAGDWRFST DIRRSWTAAS AGNLEQEAQV SLQYQVSAQY ASEHFSADIK TYVQDFDNLH VNCDAYTQCA DSRLWVQGNV VDVLTKGVEL NLGYQWDLGS VQLPLALNYQ YSNAEYQTNS CNEIQGCVVA GDRVAWLPEQ QLQLSAGMKY AEYELNANVF YQSEREMGQF GAELQPVAAQ WRVDLAANYH FNRHHEIYFR IENLLDETLV TTASNSGIRS ENGRISYLGY QWRF
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