Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_2262 |
Symbol | |
ID | 5754018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 2685885 |
End bp | 2686583 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641288553 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001554690 |
Protein GI | 160875374 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.155717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAA TACAAATAAT TTTGTTTCGA CAGCCAGGGA AAATCCACTA TCAGGGTGAA AACCTAGCGG TCGGCAGTAA TCAGTTAGTT GTAACCACGG AGGAGGCAAC AGCTTCTGCT TTGAGTCGTG ACAATTGGAT GAGCATCTTT TGTTATCCAG GTGAGCTACA CGCATTATTT CACGAAATTG CCGATCTGAT TGGTCCGAGT GCTGAGATGA ATCGATTTCA ACCTGAATCA ACAAAAATAC TCCCTGTATT TGATGAGTTA AGCAATGTCA TTGAACAGTT GAAAGGTAAT CATAATTTAT TGATTAAGTT TATTTTTATG TACTGTCTTG GCATGGATAA CCGTTACTTT TCCGGTTTAA TGCGTTACTT CTTAGCCCAT AACGACAAGA TGCTGAGCTA TCTTGAGGGC AATTTTATGC AACCTTGGCC AGTCACACGC TTTGCCGAAA ATTTAGGCAT TGAAGTACGC CGACTCAATT TCTTGTTTTA TAAAAACTAT GGTGTATCGG CAAAGCAATG GTTGTTAGAA CGGCGCTTAA GTTATGCCCG TCAGCAACTG ATAGTGACTG AGAAAAAAGT CGCCGATATT GCCTTAGATA GTGGTTTTAG TAATCACGCA CATTTTACCG AATCGTTTAA GAAACGTTAT TTATGCAGCC CAACCGTACT GCGTGCAACC TTTGTATAA
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Protein sequence | MSAIQIILFR QPGKIHYQGE NLAVGSNQLV VTTEEATASA LSRDNWMSIF CYPGELHALF HEIADLIGPS AEMNRFQPES TKILPVFDEL SNVIEQLKGN HNLLIKFIFM YCLGMDNRYF SGLMRYFLAH NDKMLSYLEG NFMQPWPVTR FAENLGIEVR RLNFLFYKNY GVSAKQWLLE RRLSYARQQL IVTEKKVADI ALDSGFSNHA HFTESFKKRY LCSPTVLRAT FV
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