| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_1166 |
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| Symbol | |
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| ID | 5752893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 1380700 |
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| End bp | 1381194 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641287436 |
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| Product | type IV pilus biogenesis protein, putative |
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| Protein accession | YP_001553602 |
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| Protein GI | 160874286 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.334361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGTCA TCTCTAAAGG GTTCACATTA GTAGAACTGA TGGTAACGAT CGCTGTAGCG
GCAATTTTAT TAACAATAGG CGTTCCATCG CTTACGTCAC TATACGAAGG GACACGCAGC
ACTAATGAAA TTAGAAAAAT TAGCGATGTG TTTGCCTTTG CAAGAAATCA AGCTGTTAAC
TATGGTGCTA CGGTTACTGT TTGCCCATAC GCTGCATCTC CATGCGGTAC TGACTGGAAT
AAAGGATTCA GTGTTTATAT AGAAAATGGA GGGGCAAAAA ACGTACTGAA AGTAATTGAT
AGTTTTAATG AACATGATGT CATTTCACTC TCGGGGCCAA CTGATAAAAA AGTAGACTTC
ACACCAGATG GCTTAGTATC AGTCGAAACA TCAATAATTT ATTGTTCAAA CGGGAAAAGT
GACGGTTCTA AAAGCCTTAA GATTAGTACT TCAGGTTTGA TAAGAGAAGG CGCAGATGGG
CAAAGCTGCA CATAA
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| Protein sequence | MLVISKGFTL VELMVTIAVA AILLTIGVPS LTSLYEGTRS TNEIRKISDV FAFARNQAVN
YGATVTVCPY AASPCGTDWN KGFSVYIENG GAKNVLKVID SFNEHDVISL SGPTDKKVDF
TPDGLVSVET SIIYCSNGKS DGSKSLKIST SGLIREGADG QSCT
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