Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0821 |
Symbol | |
ID | 5752538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 961557 |
End bp | 962654 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641287083 |
Product | porin |
Protein accession | YP_001553259 |
Protein GI | 160873943 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000436075 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.264016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CATTCATCTC TGCATCAGTT GCATCAGTAT TGGCATTGGC TTCATTCGGT GCGCTAGCCG AAGGCCCAAG CTTCTATGGT CGTTTAGAGC TTGCTTTAAC CCATACTGAC ACTGCTGCGA CCCTACAAGG CGGCACTAAC GGCATTAATA CAACTAATTA TGCCGATGAA AACAACGCTG GCACATACTT AGAAAACAAC TTTTCTCTGT TAGGTGTAAA GGGTTCAGAA AAGATTGCTG ATGGCTTTGA AGCTATCTAT CAAATGGAAT TCCAAGTTGA AAATACATCA ACAACAGGCG ATGTATTTAA AGCGCGTAAT ACTTATTTAG GTTTAAAAAC TAACGCAGGT ACTGTGTTGA TAGGCCGTAA CGATACAGTA TTCAAACAAG CCGAAGGCGG TGTGGATATT TTCGGTAACA CTAACGCCGA TATCGACCGT TTAATCAGTG GCCAAACTCG TAGCGCTGAT GGTATGTGGT ACTACTCTCC AAAAATCGCT GGTTTAGTAA CGCTGAACGC GACTTATTTG TTTGATGATA ACGACACTAC TGCAAAAACT TCTGAAAGCT TATATGCATT AAGCGCGACT TTAGGCGATA AAGCGTTTAA AGATCAAAAC TACTACGTTG CTGTAGCCTA TAACAAAGGT ATTTCAGGCA TTGATGCATA CCGTGGTGTG GCTCAAGTTA AATTAGGCCA ATTCAAAGTC GGTGGTTTAT TCCAACAATC AGAAAATGTT GTGAATAACG ATATCGATGG CAATACTTAC TTCGTGAACG TTTCTTATGA TCTGAACGGC GTAAACCTGA AAGCTGAATA CGGTGTTGAT GATGCTGGCT TCGGTAACTA CTACAAAAAC GTGAACAAAT ATACTGAAAC CGTTAATGGC AATGTAGTGA ACAGGACTAC AACTGGCACT GATATCAACG TACAAAACTT CAACGTAGGT GCTGACTACC GTTTAGCTAA ATCAACTATG GTATACGGCC AATATGCTAT GTACCGCGGT GACCATGTTG TTGCTGGTAA CAAAGTTGAT CTACAAGATG ACAACGTATT CTCTGTAGGC GTACGTTACG ACTTCTAA
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Protein sequence | MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTHTD TAATLQGGTN GINTTNYADE NNAGTYLENN FSLLGVKGSE KIADGFEAIY QMEFQVENTS TTGDVFKARN TYLGLKTNAG TVLIGRNDTV FKQAEGGVDI FGNTNADIDR LISGQTRSAD GMWYYSPKIA GLVTLNATYL FDDNDTTAKT SESLYALSAT LGDKAFKDQN YYVAVAYNKG ISGIDAYRGV AQVKLGQFKV GGLFQQSENV VNNDIDGNTY FVNVSYDLNG VNLKAEYGVD DAGFGNYYKN VNKYTETVNG NVVNRTTTGT DINVQNFNVG ADYRLAKSTM VYGQYAMYRG DHVVAGNKVD LQDDNVFSVG VRYDF
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