Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_0534 |
Symbol | |
ID | 5752251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 617040 |
End bp | 619181 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641286796 |
Product | TonB-dependent receptor |
Protein accession | YP_001552972 |
Protein GI | 160873656 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGACA ATAAGATGGC TGCAAATTCT GCGTATTTAT CTCACCCGTT TAAAACTTCA GTAATTTCCT CATCCCTCGC AATCGCCATG GGCTTATCGT TAGCACCGCA GGCAATGGCC GATGACAGCG AGTTAGCCAA TATTGAACGC TTAGAAGTCC ACGGCCAACA GACCGAAAAC CGCAACACGC TAGGTTCGGC TGAAAACCTG CTGAAAGGAC AAGGAGTAGA TTTCTCCGAA GCGGGTGGCG TATCAGCTCT GCCTATTCTC AATGGCATGA TGGGCGATCG CATCAAAGTG TTAGTTGATG GTGCGGACAT TACCGCTTCC TGCGCCAACC AAATGAATCC ACCGCTGTCC TATATTTCCG CCAATCAAGT CACCACAGCC GAAGTGATTG CGGGTGTATC GCCAGTCAGC GCGGGCGGCG ACAATATCGC GGGGGTGATC AAAGTCAGCA GCCTTAATCC TAAATTTGGC GAAAGCGATA GCATCAAGTG GAATAGCGGC GATATCTCAA CGGGATACCG CAGCGTGAGT GATACCTTGC TACTGGGCAC CAATGCCACA GTTGCCAGCA ACAATATCAG CCTAAGCTAT CAAGGCGCCT ATGAAGATGC CAACAGCTAT AAAGATGGCA ATGGCGATAA AGTCATCGAT ACCCTGTACC GCGCACAAAA CCACGCATTG ACCGCCGCAT GGCGCGATGA GACTCAACAA GTCGCCATCA AACTGACCCA TCAGAATATT CCATTTCAAG GTTTTGCTAA CCAATACATG GATATGACAG ATAACAAGAG TTACGGTGCC CTCGCCCGTT ATCAACTTAA ACTCGACGAT GACGGTGAGT TCAGTGCCCA ATTCAATTGG CACGGCGTGA AGCACGAGAT GGGCTTTTTT ACCCCAGAAA AAACCGGCAA GATGCCGATG AACACTGAAG GTGATGACTA CAGCTATCAA CTGCACTGGC GCTTGCCAAT GGGTGATGAC AGCACCTTAC TGGTCGGCCA AGAATTCTAT AGCTACCAGC TCGACGATGT GTGGCCTGCG GTGCCAGGCA CTATGATGGC GCCGAATGAT TACATCAACA TCAACGATGG CGAACGTCGC CGCGCCGCCG TTTATGGCGA ATGGCAGCAA GATTTGAGCT CTAGCTGGTG GTTATCGGCG GGTGTTCGCT TTGAGTATGT CACCACCAAT ACTGGTGAAG TCCAAGCCTA TAGCAACATG CCAATGATGG GCATGCCGAA TATGGATGCC GCTGCGGCGC AGGCCTTTAA TGCGATGGAC AGAGAGCGTA ATGATGATCT GATCGACGCC ACTTTACTGG CTCGCTATCA ATTATCGGCC AATCAACAAC TTGAGTTTGG CCTTGCCCGC AAGAATCGTG CCCCCAATCT ATACGAACGT TACAGCTGGG GCCGCGGCAC TATGGCAACC ACTATGATAG GTTGGTATGG CGATGGTAAT GGTTATGTGG GTAATCCAGA TCTAAAGCCA GAAACTGCCC ACACCCTGAG CGCAGCCTAC AAATATAACG GTGATAGCTG GCAAGTCTCG ACCACAGCTT GGTACACAGC GGTGACTGAC TATATCGATG CCGAAGTGAT TGGTAGCTTC AATCGCACTA GCTCAGCTGA TGGCAAACGC AATATTCTTC AATTCACTAA CTTAGATGCC AATCTCTATG GCGCACGCTT TAATGCGCTC TATCAGTTTG CTGAAACCAG CACAGGTAAA TGGCAAGTGT TAGGCAAAGT AAATTTGACC CGTGGTGAGC GAGATGAAGG CAATGAGCCT TTATATCAAA TCAAGCCGCT GCAAACCGAG CTGGCACTGC AACATCAACT CGGTAACTGG GAAAACAGTC TTTCATGGCA ATGGGTTGCG ACCAAAGATC GCGTGGATGA CCGCCGCCTT GAAAATGAAA CCGATAGCTA CTCCTTACTT AACTTAAACA GCAGCATGAA ATGGCAGGAT CTGACTGTCA CCTTCGCCGT GAATAACCTA TTAGACAGCT ATTATGAGCT GCCGCTGGGC GGTGTGAGTG TGGCGGAATT TAAGGCCGAT AACACCAATG GCTTTAACCA GATTGCCGGT GCAGGCCGCT CGTTCGAACT CAGCGCAAGC TATGCGTTTT AA
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Protein sequence | MEDNKMAANS AYLSHPFKTS VISSSLAIAM GLSLAPQAMA DDSELANIER LEVHGQQTEN RNTLGSAENL LKGQGVDFSE AGGVSALPIL NGMMGDRIKV LVDGADITAS CANQMNPPLS YISANQVTTA EVIAGVSPVS AGGDNIAGVI KVSSLNPKFG ESDSIKWNSG DISTGYRSVS DTLLLGTNAT VASNNISLSY QGAYEDANSY KDGNGDKVID TLYRAQNHAL TAAWRDETQQ VAIKLTHQNI PFQGFANQYM DMTDNKSYGA LARYQLKLDD DGEFSAQFNW HGVKHEMGFF TPEKTGKMPM NTEGDDYSYQ LHWRLPMGDD STLLVGQEFY SYQLDDVWPA VPGTMMAPND YININDGERR RAAVYGEWQQ DLSSSWWLSA GVRFEYVTTN TGEVQAYSNM PMMGMPNMDA AAAQAFNAMD RERNDDLIDA TLLARYQLSA NQQLEFGLAR KNRAPNLYER YSWGRGTMAT TMIGWYGDGN GYVGNPDLKP ETAHTLSAAY KYNGDSWQVS TTAWYTAVTD YIDAEVIGSF NRTSSADGKR NILQFTNLDA NLYGARFNAL YQFAETSTGK WQVLGKVNLT RGERDEGNEP LYQIKPLQTE LALQHQLGNW ENSLSWQWVA TKDRVDDRRL ENETDSYSLL NLNSSMKWQD LTVTFAVNNL LDSYYELPLG GVSVAEFKAD NTNGFNQIAG AGRSFELSAS YAF
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