| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4370 |
|---|
| Symbol | fdhE |
|---|
| ID | 6271899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4081024 |
|---|
| End bp | 4081953 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641728174 |
|---|
| Product | formate dehydrogenase accessory protein FdhE |
|---|
| Protein accession | YP_001882587 |
|---|
| Protein GI | 187731258 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3058] Uncharacterized protein involved in formate dehydrogenase formation |
|---|
| TIGRFAM ID | [TIGR01562] formate dehydrogenase accessory protein FdhE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTC GCATAATCCC GCAAGATGAG CTGGGTTCGA GCGAGAAACG TACGGCGGAT
ATGATTCCGC CGTTATTGTT CCCTCGGCTC AAGAATTTAT ACAACCGCCG CGCCGAGCGT
CTGCGCGAGC TGGCAGAAAA TAATCCGCTG GATGATTACC TGCGCTTTGC TGCGCTTATC
GCCCACGCCC AGGAAGTGGT GCTGTACGAC CATCCGCTGG AGATGGATCT GACCGCGCGC
ATTAAAGAAG CCAGCGCACA GGGCAAGCCC CCGCTGGATA TTCACGTTCT GCCGCGTGAT
AAGCACTGGC AAAAGCTGCT GATGGCGCTG ATTGCTGAGC TGAAACCTGA AATGAGCGGC
CCGGCGCTGG CAGTGATTGA GAATCTGGAG AAGGCATCGA CTCAGGAGCT GGAAGATATG
GCCAGCGCAC TGTTTGCCTC TGATTTCTCA TCCGTCAGCA GCGATAAAGC GCCGTTTATC
TGGGCTGCAC TGTCGCTCTA CTGGGCGCAG ATGGCCAATC TGATCCCCGG CAAAGCCCGC
GCTGAATACG GCGAGCAACG TCAATATTGC CCGGTTTGTG GTTCTATGCC GGTGTCCAGC
ATGGTGCAAA TTGGCACCAC TCAGGGTCTG CGTTACCTGC ACTGCAACCT GTGTGAAACC
GAATGGCACG TAGTGCGCGT AAAATGCAGC AACTGTGAAC AGAGCGGCAA ACTGCATTAC
TGGTCGCTGG ATGACGAACA GGCCGCGATT AAAGCCGAAA GCTGCGATGA CTGCGGCACT
TACCTGAAGA TTCTTTATCA GGAAAAAGAA CCGAAAGTTG AAGCCGTGGC AGATGACCTC
GCTTCTCTGG TACTGGACGC GCGAATGGAG CAAGAAGGCT ATGCCCGCAG TTCCATCAAC
CCGTTCCTGT TTCCGGGTGA AGGGGAGTAA
|
|---|
| Protein sequence | MSIRIIPQDE LGSSEKRTAD MIPPLLFPRL KNLYNRRAER LRELAENNPL DDYLRFAALI
AHAQEVVLYD HPLEMDLTAR IKEASAQGKP PLDIHVLPRD KHWQKLLMAL IAELKPEMSG
PALAVIENLE KASTQELEDM ASALFASDFS SVSSDKAPFI WAALSLYWAQ MANLIPGKAR
AEYGEQRQYC PVCGSMPVSS MVQIGTTQGL RYLHCNLCET EWHVVRVKCS NCEQSGKLHY
WSLDDEQAAI KAESCDDCGT YLKILYQEKE PKVEAVADDL ASLVLDARME QEGYARSSIN
PFLFPGEGE
|
|---|
| |