| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4026 |
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| Symbol | |
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| ID | 6270270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3757241 |
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| End bp | 3759502 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641727866 |
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| Product | haemagglutinin family |
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| Protein accession | YP_001882298 |
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| Protein GI | 187731863 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGACGA ATACCACCAA TATCGCCAAT AACACTTCCA ATATTGCCAC TAACACCACC
AACATCTCTA ATCTGACTGA GACGGTGACT AATCTTGGTG AGGATGCGCT GAAATGGGAT
AAGGACAATG GTGTATTCAC GGCAGCTCAT GGCACCGAGA CCACCAGCAA AATCACCAAC
GTTAAAGATG GCGACCTGAC GACTGGCAGC ACCGATGCCG TTAACGGCTC TCAGCTGAAA
ACCACCAACG ATGCCGTGGC GACGAATACC ACCAATATCG CCACTAACAC CACCAACATC
TCTAATCTGA CTGAGACGGT GACTAATCTT GGTGAGGATG CGCTGAAATG GGATAAGGAC
AATGGTGTCT TCACTGCAGC TCATGGCAAC AATACCGCCA GCAAAATCAC CAATATCCTG
GACGGCACAG TCACTGCAAC CAGTTCCGAT GCCATTAACG GTAGCCAGCT TTATGACTTA
AGCAGCAATA TCGCCACCTA CTTCGGCGGC AATGCTTCTG TGAATACTGA CGGTGTGTTT
ACCGGTCCAA CCTACAAAAT CGGTGAAACA AATTATTATA ACGTCGGCGA TGCACTGGCT
GCGATTAACT CCTCATTTAG CACGTCTCTC GGCGATGCTC TGCTTTGGGA TGCCACCGCA
GGTAAATTCA GTGCCAAACA CGGTACTAAT GGTGACGCAA GCGTGATCAC TGATGTCGCA
GATGGTGAAA TTTCAGACTC CAGTTCTGAC GCAGTAAACG GCTCACAACT CCACGGCGTG
AGCAGTTATG TTGTTGATGC GCTGGGGGGT GGTGCCGAAG TCAATGCAGA CGGCACCATC
ACTGCGCCGA CGTACACCAT TGCTAATGCT GATTACGATA ATGTCGGTGA TGCCCTGAAT
GCTATCGATA CCACTCTTGA CGACGCTCTG CTCTGGGATG CGGACGCCGG TGAAAATGGT
GCATTTAGCG CCGCTCATGG AAAAGATAAA ACTGCCAGTG TAATCACTAA CGTCGCTAAC
GGTGCAATCT CTGCTGCCAG CAGCGACGCG ATTAACGGCT CACAACTCTA TACCACCAAT
AAGTACATCG CTGATGCGCT GGATGGTGAC GCAGAAGTCA ACGCTGACGG CACCATCACC
GCACCGACTT ACACCATTGC GAACGCCGAG TACAACAACG TCGGTGACGC CCTGGATGCG
CTTGATGATA ACGCCCTGCT GTGGGATGAG ACTGCCAATG GCGGTGCTGG AGCCTACAAT
GCCAGCCATG ACGGTAAAGC CAGCATCATC ACTAATGTCG CTAATGGCAG TATTAGTGAG
GACAGTACCG ATGCAGTGAA CGGTTCTCAG TTGAATGCGA CGAATATGAT GATTGAGCAG
AACACCCAAA TTATCAATCA GCTCGCTGGT AACACCGACG CAACCTATAT CCAAGAAAAC
GGTGCGGGTA TTAACTATGT GCGTACTAAC GACGACGGCT TAGCGTTCAA CGACGCCAGC
GCACAGGGTG TTGGCGCTAC AGCTATAGGT TATAACTCTG TCGCCAAAGG CGATAGCAGC
GTAGCTATTG GTCAGGGCAG CTACAGCGAC GTTGATACGG GTATCGCCCT AGGTAGCAGC
TCTGTTTCCA GCCGAGTGAT TGCCAAAGGC TCCCGTGACA CCAGCATAAC GGAAAATGGC
GTTGTTATTG GTTACGACAC CACGGATGGC GAACTGCTCG GTGCATTGTC TATCGGTGAT
GACGGTAAAT ATCGTCAAAT CATCAACGTA GCCGATGGTT CCGAAGCCCA TGACGCCGTT
ACGGTTCGTC AATTGCAGAA TGCGATTGGT GCGGTCGCAA CCACGCCGAC TAAATACTTC
CACGCTAATT CAACGGAAGA AGATTCACTG GCAGTGGGAA CTGACTCGCT GGCAATGGGT
GCGAAAACCA TCGTGAATGG CGATAAAGGT ATTGGTATCG GTTATGGTGC CTACGTGGAC
GCGAATGCAC TTAACGGCAT TGCCATTGGT AGCAATGCGC AAGTCATTCA TGTCAACAGT
ATTGCGATAG GTAATGGTTC TACGACCACT CGTGGCGCTC AAACCAATTA TACCGCCTAC
AACATGGACG CACCGCAGAA CTCTGTCGGT GAATTCTCAG TCGGTAGTGC GGATGGTCAA
CGTCAGATCA CAAACGTCGC AGCTGGTTCA GCGGATACCG ATGCGGTTAA CGTGGGTCAG
TTGAAAGTCA CTGATGAGCG CGTAGCGCAA AATACCCAGT AG
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| Protein sequence | MATNTTNIAN NTSNIATNTT NISNLTETVT NLGEDALKWD KDNGVFTAAH GTETTSKITN
VKDGDLTTGS TDAVNGSQLK TTNDAVATNT TNIATNTTNI SNLTETVTNL GEDALKWDKD
NGVFTAAHGN NTASKITNIL DGTVTATSSD AINGSQLYDL SSNIATYFGG NASVNTDGVF
TGPTYKIGET NYYNVGDALA AINSSFSTSL GDALLWDATA GKFSAKHGTN GDASVITDVA
DGEISDSSSD AVNGSQLHGV SSYVVDALGG GAEVNADGTI TAPTYTIANA DYDNVGDALN
AIDTTLDDAL LWDADAGENG AFSAAHGKDK TASVITNVAN GAISAASSDA INGSQLYTTN
KYIADALDGD AEVNADGTIT APTYTIANAE YNNVGDALDA LDDNALLWDE TANGGAGAYN
ASHDGKASII TNVANGSISE DSTDAVNGSQ LNATNMMIEQ NTQIINQLAG NTDATYIQEN
GAGINYVRTN DDGLAFNDAS AQGVGATAIG YNSVAKGDSS VAIGQGSYSD VDTGIALGSS
SVSSRVIAKG SRDTSITENG VVIGYDTTDG ELLGALSIGD DGKYRQIINV ADGSEAHDAV
TVRQLQNAIG AVATTPTKYF HANSTEEDSL AVGTDSLAMG AKTIVNGDKG IGIGYGAYVD
ANALNGIAIG SNAQVIHVNS IAIGNGSTTT RGAQTNYTAY NMDAPQNSVG EFSVGSADGQ
RQITNVAAGS ADTDAVNVGQ LKVTDERVAQ NTQ
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