| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3867 |
|---|
| Symbol | livG |
|---|
| ID | 6272264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3593192 |
|---|
| End bp | 3593959 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641727723 |
|---|
| Product | leucine/isoleucine/valine transporter ATP-binding subunit |
|---|
| Protein accession | YP_001882158 |
|---|
| Protein GI | 187732860 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGC CATTATTATC TGTGAACGGC CTGATGATGC GCTTCGGCGG CCTGCTGGCG
GTGAACAACG TCAATCTTGA ACTGTACCCG CAGGAGATCG TCTCGTTAAT CGGTCCTAAC
GGTGCCGGAA AAACCACGGT CTTTAACTGC CTGACCGGAT TCTACAAACC CACTGGAGGC
ACCATTTTAC TGCGCGATCA GCATCTGGAA GGTTTACCGG GGCAGCAAAT TGCCCGCATG
GGCGTGGTGC GTACCTTCCA GCATGTGCGT CTGTTCCGTG AAATGACGGT GATTGAAAAC
CTGCTGGTGG CGCAGCATCA GCAACTGAAA ACCGGGCTGT TCTCTGGCCT GTTGAAAACG
CCATCCTTCC GTCGCGCCCA GAGCGAAGCG CTCGATCGCG CCGCGACCTG GCTTGAGCGC
ATTGGTTTGC TGGAACACGC CAACCGTCAG GCGAGTAACC TGGCCTATGG TGACCAGCGC
CGTCTTGAGA TTGCCCGCTG CATGGTGACG CAGCCGGAGA TTTTAATGCT CGACGAACCT
GCGGCAGGTC TTAACCCGAA AGAGACGAAA GAGCTGGATG AGCTGATTGC CGAACTGCGC
AATCATCACA ACACCACTAT CTTGTTGATT GAACACGATA TGAAGCTGGT GATGGGAATT
TCGGACCGAA TTTACGTGGT CAATCAGGGG ACGCCACTGG CAAACGGTAC GCCGGAGCAA
ATCCGTAATA ACCCGGACGT GATCCGTGCC TATTTAGGTG AGGCATAA
|
|---|
| Protein sequence | MSQPLLSVNG LMMRFGGLLA VNNVNLELYP QEIVSLIGPN GAGKTTVFNC LTGFYKPTGG
TILLRDQHLE GLPGQQIARM GVVRTFQHVR LFREMTVIEN LLVAQHQQLK TGLFSGLLKT
PSFRRAQSEA LDRAATWLER IGLLEHANRQ ASNLAYGDQR RLEIARCMVT QPEILMLDEP
AAGLNPKETK ELDELIAELR NHHNTTILLI EHDMKLVMGI SDRIYVVNQG TPLANGTPEQ
IRNNPDVIRA YLGEA
|
|---|
| |