Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3835 |
Symbol | |
ID | 6271423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3561116 |
End bp | 3562183 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641727692 |
Product | auxiliary transport protein, membrane fusion protein (MFP) family |
Protein accession | YP_001882127 |
Protein GI | 187731630 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAAGA GTAAGCGCCA TCTGGCGTGG TGGGTTGTCG GGGCACTGGC GGTGGCTGCC GTCGTGGCGT GGTGGCTGTT GCGCCCGGCG GGTGTGCCGG AAGGCTTTGC TGTCAGCAAT GGGCGCATTG AAGCGACGGA AGTGGATATC GCCAGCAAAA TTGCCGGGCG TATCGACACC ATTCTGGTGA AAGAAGGCCA GTTTGTTCGC GAAGGTGAAG TGCTGGCGAA GATGGATACT CGCGTGTTGC AGGAACAGCG ACTGGAAGCC ATCGCGCAAA TCAAAGAGGC ACAAAGCGCC GTTGCCGCCG CGCAGGCTTT GCTGGAGCAA CGACAAAGCG AAACTCGCGC CGCGCAGTCG CTGGTTAATC AACGCCAGGC AGAACTGGAC TCCGTAGCAA AACGTCATAT GCGTTCCCGT TCACTGGCCC AACGAGGGGC TATTTCTGCG CAACAGCTGG ATGACGACCG CGCCGCCGCT GAGAGCGCCC GAGCTGCGCT GGAATCGGCA AAAGCTCAGG TTTCTGCTTC TAAAGCCGCT ATAGAGGCGG CACATACCAA TATCATTCAG GCGCAAACCC GCGTCGAAGC GGCACAAGCC ACTGAACGGC GCATTGCCGC AGATATCGAT GACAGCGAAC TGAAAGCCCC GCGTGACGGA CGCGTGCAGT ATCGGGTTGC CGAGCCAGGG GAAGTGCTGG CGGCAGGCGG TCGGGTGCTG AATATGGTCG ATCTCAGCGA CGTCTATATG ACTTTCTTCC TGCCAACCGA ACAGGCGGGC ACGCTAAAAC TGGGCGGTGA AGCACGGCTG ATCCTCGATG CCGCGCCAGA TCTGCGTATT CCGGCGACCA TCAGTTTTGT CGCCAGCGTC GCCCAGTTCA CGCCAAAAAC CGTCGAAACC AGCGATGAAC GGCTGAAACT GATGTTCCGC GTCAAAGCGC GTATCCCACC GGAATTACTC CAGCAGCATC TGGAATATGT CAAAACGGGC TTGCCGGGCG TAGCATGGGT GCGGGTGAAT GAAGAACTTC CGTGGCCTGA CGACCTGGTG GTGAGGTTGC CGCAATGA
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Protein sequence | MDKSKRHLAW WVVGALAVAA VVAWWLLRPA GVPEGFAVSN GRIEATEVDI ASKIAGRIDT ILVKEGQFVR EGEVLAKMDT RVLQEQRLEA IAQIKEAQSA VAAAQALLEQ RQSETRAAQS LVNQRQAELD SVAKRHMRSR SLAQRGAISA QQLDDDRAAA ESARAALESA KAQVSASKAA IEAAHTNIIQ AQTRVEAAQA TERRIAADID DSELKAPRDG RVQYRVAEPG EVLAAGGRVL NMVDLSDVYM TFFLPTEQAG TLKLGGEARL ILDAAPDLRI PATISFVASV AQFTPKTVET SDERLKLMFR VKARIPPELL QQHLEYVKTG LPGVAWVRVN EELPWPDDLV VRLPQ
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