Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3117 |
Symbol | cas5e |
ID | 6268384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2911968 |
End bp | 2912609 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727042 |
Product | CRISPR-associated protein Cas5 |
Protein accession | YP_001881501 |
Protein GI | 187733438 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGGGGC TGCTGGCTGC CGGGGTAGGG ATCCGGCGTG ATGATACCGA ACGCTTAAAC GCGTTTAATC GCCACTATTC ACTGGTGGTT TGCGCCAGCC GTAACCCGCG CTGGGCACGG GATTATCACA CGGTCCAGAT GCCAAAAGAG GTGCGTAAAG CACGTTATTT CAGCCGTCGC GAAGAGTTGA GCGACCCTGA GCTTTTGAGC GCGATTATCT CCCGGCGCGA CTACTACACC GATGCCTGGT GGATGGTGGC GGTGGCAACA ACAGCCGATG CGCCTTACAG CCTCGAACAG TTGCAGGACG GTTTACGCCA TCCAGTTTTT CCGCTTTATC TGGGGCGAAA AAGTCATCCG CTGGCATTAC CTCTTGCGCC GTTACTGCTC GAAGGCAACG CGTGTGATGC CTTATGTAAT GCATACCAAC AGTATCAGGA TCATTTCCAT AAACTGAAAG TTTCACTCCC GAAACTTCAG GATGAATGCT GGTGGGAAGG GAAACACGAC GGCCTGGTCG CGAGCAAAAT ATTACGCCGC CGGGATGTTC CTTTAAATCG TCAGCAGTGG CTGTTTGGGG AACGCACCGT CAATCAGGGG CCGTGGCTCA GCAAGGAGGA ACCATGTACC TCTCAAGAAT AA
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Protein sequence | MLGLLAAGVG IRRDDTERLN AFNRHYSLVV CASRNPRWAR DYHTVQMPKE VRKARYFSRR EELSDPELLS AIISRRDYYT DAWWMVAVAT TADAPYSLEQ LQDGLRHPVF PLYLGRKSHP LALPLAPLLL EGNACDALCN AYQQYQDHFH KLKVSLPKLQ DECWWEGKHD GLVASKILRR RDVPLNRQQW LFGERTVNQG PWLSKEEPCT SQE
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