Gene SbBS512_E2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2713 
Symbol 
ID6272399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2514046 
End bp2514315 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content53% 
IMG OID641726677 
Productfimbrial protein 
Protein accessionYP_001881157 
Protein GI187733406 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.790639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG CACACATTTA TTCACCCGGT TATGCGCTGT TAGCAGGCCT GCTGCTGACC 
GCCAGCACAG GAGCACAGGC AGTCGACAAC AACCTGCATT TTTACGGCAA CCTGCTGAGT
AAATCCTGCA CGCTGGTGGT GGATGGTGCC AACCTGGCAG AAATCCATTT TCCCACCGTC
AGCAACCGGG ATTTGATGGT ATCTGGGCAG TCCGCGCATC TGCCGGTTGT GTTTAAGCTG
AAAGACTGCA AAGGTAAGCG TACAGCCTGA
 
Protein sequence
MKTAHIYSPG YALLAGLLLT ASTGAQAVDN NLHFYGNLLS KSCTLVVDGA NLAEIHFPTV 
SNRDLMVSGQ SAHLPVVFKL KDCKGKRTA