| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2110 |
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| Symbol | |
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| ID | 6272320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1918645 |
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| End bp | 1920351 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641726145 |
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| Product | invasion plasmid antigen |
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| Protein accession | YP_001880639 |
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| Protein GI | 187731730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACCGA TAAATAATAA CTTTTCATTG TCCCAAAATT CTTTTTATAA CACTATTTCC
GGTACATATG CTGATTACTT TTCAGCATGG GATAAATGGG AAAAACAAGC GCTCCCCGGT
GAAAATCGGA ATGAAGCGGT CTCCCTACTT AAAGAATGTC TCATCAATCA GTTCAGTGAG
CTTCAACTGA ATCGTTTAAA TCTGTCCTCG CTACCTGACA ACTTACCACC TCAAATCACT
GTTCTGGAAA TTACTCAGAA TGCCCTAATA TCATTACCAG AATTGCCAGC ATCGCTGGAA
TACCTTGACG CCTGTGACAA TCACCTGTCA ACACTTCCTG AATTACCCGC ATCTCTGAAA
CATCTTGATG TAGATAACAA CCAACTAACC ATGCTTCCTG AATTGCCTGC ATTGCTGGAA
TATATTAATG CAGATAACAA TCAGCTAACC ATGCTTCCTG AATTACCTAC ATCGCTGGAA
GTGCTCTCAG TAAGAAATAA CCAGCTGACA TTTCTTCCTG AGTTACCTGA ATCACTGGAA
GCGCTCGATG TAAGTACTAA TCTTCTGGAA AGCCTACCAG CCGTACCTGT AAGAAATCAT
CACTCAGAGG AAACCGAGAT ATTTTTCCGG TGCCGCGAGA ATCGCATCAC ACACATTCCG
GAAAATATAC TTAGCCTTGA TCCGACCTGC ACTATCATCC TCGAAGACAA TCCTCTGTCC
TCACGGATCA GGGAGTCTCT GTCGCAACAA ACCGCCCAAC CGGACTACCA CGGCCCACGG
ATTTACTTCT CCATGAGTGA CGGACAACAG AATACACTCC ATCGCCCCCT GGCTGATGCC
GTGACAGCAT GGTTCCCGGA AAACAAACAA TCTGATGTAT CACAGATATG GCATGCTTTT
GAACATGAAG AGCACGCCAA CACCTTTTCC GCGTTCCTTG ACCGCCTTTC CGATACCGTC
TCTGCACGCA ATACCTCCGG ATTCCGTGAA CAGGTCGCTG CATGGCTGGA AAAACTCAGT
GCCTCTGCGG AGCTTCGACA GCAGTCTTTC GCTGTTGCTG CTGATGCCAC TGAGAGCTGT
GAGGACCGTG TCGCGCTCAC ATGGAACAAT CTCCGGAAAA CCCTCCTGGT CCATCAGGCA
TCAGAAGGCC TTTTCGATAA TGATACCGGC GCTCTGCTCT CCCTGGGCAG GGAAATGTTC
CGCCTCGAAA TTCTGGAGGA CATTGCCCGG GATAAAGTCA GAACTCTCCA TTTTGTGGAT
GAGATAGAAG TCTACCTGGC CTTCCAGACC ATGCTCGCAG AGAAACTTCA GCTCTCCACT
GCCGTGAAGG AAATGCGTTT CTATGGCGTG TCGGGAGTGA CAGCAAATGA CCTCCGCACT
GCCGAAGCCA TGGTCAGAAG CCGTGAAGAG AATGAATTTA CGGACTGGTT CTCCCTCTGG
GGACCATGGC ATGCTGTACT GAAGCGTACG GAAGCTGACC GCTGGGCGCT GGCAGAAGAG
CAGAAATATG AGATGCTGGA GAATGAGTAC CCTCAGAGGG TGGCTGACCG GCTGAAAGCA
TCAGGTCTGA GCGGTGATGC GGATGCGGAG AGGGAAGCCG GTGCACAGGT GATGCGTGAG
ACTGAACAGC AGATTTACCG TCAGCTGACT GACGAGGTAC TGGCCCTGCG ATTGTCTGAA
AACGGCTCAC AACTGCACCA TTCATAA
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| Protein sequence | MLPINNNFSL SQNSFYNTIS GTYADYFSAW DKWEKQALPG ENRNEAVSLL KECLINQFSE
LQLNRLNLSS LPDNLPPQIT VLEITQNALI SLPELPASLE YLDACDNHLS TLPELPASLK
HLDVDNNQLT MLPELPALLE YINADNNQLT MLPELPTSLE VLSVRNNQLT FLPELPESLE
ALDVSTNLLE SLPAVPVRNH HSEETEIFFR CRENRITHIP ENILSLDPTC TIILEDNPLS
SRIRESLSQQ TAQPDYHGPR IYFSMSDGQQ NTLHRPLADA VTAWFPENKQ SDVSQIWHAF
EHEEHANTFS AFLDRLSDTV SARNTSGFRE QVAAWLEKLS ASAELRQQSF AVAADATESC
EDRVALTWNN LRKTLLVHQA SEGLFDNDTG ALLSLGREMF RLEILEDIAR DKVRTLHFVD
EIEVYLAFQT MLAEKLQLST AVKEMRFYGV SGVTANDLRT AEAMVRSREE NEFTDWFSLW
GPWHAVLKRT EADRWALAEE QKYEMLENEY PQRVADRLKA SGLSGDADAE REAGAQVMRE
TEQQIYRQLT DEVLALRLSE NGSQLHHS
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