Gene SbBS512_E1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1998 
Symbol 
ID6270385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp1821956 
End bp1822534 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID641726051 
Producthypothetical protein 
Protein accessionYP_001880545 
Protein GI187733535 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.831633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTG AGCGTAAATT TCTTTTCGCC TGTCTTATTT TTGCGCTGGT CATTTACGCT 
ATCCACGCTT TCGGTTTATT CGATCTGCTC ACCGATTTAC CCCACTTACA GACACTCATT 
CGCCAGAGCG GATTGTTCGG TTATAGCCTC TATATTCTGT TATTCATCAT TGCCACCCTC 
TTTCTGTTAC CAGGAAGCAT ACTGGTGATC GCTGGAGGAA TAGTTTTTGG CCCGCTCTTA 
GGGACACTAC TCTCATTAAT TGCCGCCACG CTGGCCTCCT CGTGCTCATT CCTGCTGGCG 
CGGTGGCTGG GACGTGATTT ACTGCTGAAA TACGTGGGCC ATAGCCATAC CTTCCAGGCC 
ATTGAAAAAG GCATTGCGCG TAACGGTATT GATTTTCTTA TTCTGACCCG CTTAATCCCG 
TTGTTTCCTT ACAATATTCA AAATTACGCT TACGGATTAA CCACCATCGC CTTCTGGCCT 
TATACCCTTA TTTCGGCACT CACGACCCTG CCCGGTATTG TTATTTATAC CGTGATGGCA 
AGCGATCTCG CCAATGAAGG CATTACGCTG CGCTGGTAA
 
Protein sequence
MNAERKFLFA CLIFALVIYA IHAFGLFDLL TDLPHLQTLI RQSGLFGYSL YILLFIIATL 
FLLPGSILVI AGGIVFGPLL GTLLSLIAAT LASSCSFLLA RWLGRDLLLK YVGHSHTFQA 
IEKGIARNGI DFLILTRLIP LFPYNIQNYA YGLTTIAFWP YTLISALTTL PGIVIYTVMA 
SDLANEGITL RW