Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1765 |
Symbol | |
ID | 6270443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 1608894 |
End bp | 1609424 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641725839 |
Product | protein HipA |
Protein accession | YP_001880337 |
Protein GI | 187730858 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATATG AATCAGATGG AGGCCCAGGC ATCGCGCGGA TCATGGCGTT TTTGATGGGG TCCAGCGAGG CGCTTCGCGA TCGTTATGAT TTTATGAAAT TCCAGGTCTT CCAGTGGTTG ATTGGCGCAA CGGATGGCCA TGCAAAAAAC TTCTCCGTAT TTATTCAGGC TGGCGGCAGT TATCGACTCA CGCCATTTTA CGACATCATT TCAGCATTTC CGGTCCTTGG CGGTACGGGA ATACACATCA GCGATCTCAA ACTGGCAATG GGGCTTAACG CATCCAAAGG CAAAAAAATG GCAATCGATA AAATTTATCC GCGACATTTT TTGGCGACAG CAACGGTGCT GAGATTCCCG GAAGTGCAGA TGCATGAAAT CCTAAGTGAC TTTGCCAGAA TGATTCCGGC AGCACTGGAT AACGTGAAGA CTTCATTACC GACAGATTTT CCGGAGAACG TGGTGACGGC AGTTGAAACC AATGTGTTGA GGTTGCATGG ACGGTTAAGC CGAGAATACG GTAGTAAGTG A
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Protein sequence | MKYESDGGPG IARIMAFLMG SSEALRDRYD FMKFQVFQWL IGATDGHAKN FSVFIQAGGS YRLTPFYDII SAFPVLGGTG IHISDLKLAM GLNASKGKKM AIDKIYPRHF LATATVLRFP EVQMHEILSD FARMIPAALD NVKTSLPTDF PENVVTAVET NVLRLHGRLS REYGSK
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