| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1586 |
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| Symbol | |
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| ID | 6271051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1445784 |
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| End bp | 1447076 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641725676 |
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| Product | sensory box-containing diguanylate cyclase |
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| Protein accession | YP_001880181 |
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| Protein GI | 187732577 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTGGC TTTTTTGCGA TCGGATAGCA ACAAAAATTG ATAAAAATAA CGGGATCTCA
ATGATTACGC ACAACTTCAA TACCCTGGAC TTACTCACCA GTCCTGTCTG GATTGTTTCG
CCCTTTGAGG AACAGTTAAT TTATGCCAAT AGCGCGGCGC GACTGTTGAT GCAAGACCTC
ACGTTTAGTC AGCTACGAAC CGGACCCTAT TCCGTCTCCT CACAAAAAGA ACTGCCGAAA
TACCTCTCCG ATCTGCAAAA CCAACACGAT ATTATCGAAA TCCTCACTGT TCAGCGTAAA
GAAGAGGAAA CAGCATTAAG CTGTCGGCTT GTTTTGCGAG AGCTGACAGA AACAGAACCG
GTGATTATTT TCGAAGGTAT CGAAGCGCCG GCAACGCTGG GTTTAAAAGC CAGTCGCTCG
GCAAATTATC AGCGCAAAAA ACAAGGTTTT TATGCGCGCT TTTTTCTGAC TAACTCTGCA
CCAATGTTGT TGATTGACCC CTCACGAGAT GGCCAAATCG TCGATGCTAA CCTCGCCGCG
CTCAATTTCT ACGGTTATAA CCATGAAACG ATGTGCCAGA AACATACCTG GGAAATTAAT
ATGCTCGGGC GTCGCGTCAT GCCTATCATG CATGAAATTT CGCATTTACC CGGCGGTCAT
AAACCTTTGA ATTTTGTTCA TAAACTGGCG GATGGATCTA CTCGTCATGT GCAGACCTAT
GCCGGGCCGA TTGAAATTTA TGGCGACAAG CTCATGTTAT GTATTGTGCA TGATATTACT
GAGCAAAAAC GGCAGGAGGA GCAGCTGGAA CATGCTGCTC ACCATGACGC GATGACCGGA
TTACTGAATC GGCGACAGTT TTATCACATT ACGGAACCAG GCCAAATGCA GCACCTCGCC
ATCGCCCAGG ATTACAGCTT GTTGCTCATC GACACCAATC GTTTTAAACA CATTAACGAT
CTCTATGGGC ATTCTAAAGG TGATGAGGTG TTATGCGCCC TCGCCCGCAC CCTCGAAAGT
TGCGCTCGCA AAGGCGATTT GGTGTTTCGT TGGGGAGGCG AAGAGTTTGT CTTATTGATA
CCAAGAACCC CACTGGATAC TGCGCTTTCG CTGGCTGAAA CTATCCGTGT AAGCGTGGCC
AAAGTGAGTA TTTCGGGCTT ACCACGTTTT ACCGTCAGCA TTGGTGTGGC GCATCACGAA
GGAAATGAAA GCATCGATGA ACTGTTTAAA CGCGTTGATG ATGCTTTGTA TCGGGCGAAA
AATGATGGAC GCAACCGCGT GCTGGCGGCA TAA
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| Protein sequence | MTWLFCDRIA TKIDKNNGIS MITHNFNTLD LLTSPVWIVS PFEEQLIYAN SAARLLMQDL
TFSQLRTGPY SVSSQKELPK YLSDLQNQHD IIEILTVQRK EEETALSCRL VLRELTETEP
VIIFEGIEAP ATLGLKASRS ANYQRKKQGF YARFFLTNSA PMLLIDPSRD GQIVDANLAA
LNFYGYNHET MCQKHTWEIN MLGRRVMPIM HEISHLPGGH KPLNFVHKLA DGSTRHVQTY
AGPIEIYGDK LMLCIVHDIT EQKRQEEQLE HAAHHDAMTG LLNRRQFYHI TEPGQMQHLA
IAQDYSLLLI DTNRFKHIND LYGHSKGDEV LCALARTLES CARKGDLVFR WGGEEFVLLI
PRTPLDTALS LAETIRVSVA KVSISGLPRF TVSIGVAHHE GNESIDELFK RVDDALYRAK
NDGRNRVLAA
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