Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0293 |
Symbol | ampH |
ID | 6272654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 287294 |
End bp | 288451 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641724533 |
Product | beta-lactam binding protein AmpH |
Protein accession | YP_001879083 |
Protein GI | 187734171 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACGTA GTCTACTTTT TTCTGCCGTG CTGTGTGCGG CGTCATTGAC CTCCGTCCAT GCGGCGCAGC CGATCACTGA ACCGGAGTTT GCCTCTGATA TTGTCGATCG TTATGCCGAT CATATTTTTT ACGGCAGCGG TGCCACGGGG ATGGCGCTGG TTGTTATCGA CGGTAACCAG CGCGTCTTTC GCAGTTATGG CGAAACGCGA CCTGGTAATA ACGTTCGCCC GCAGCTGGAT TCGGTCGTGC GTATTGCTTC CCTCACCAAG CTAATGACCA GTGAAATGCT GGTGAAATTG CTCGACCAGG GGACCGTGAA GTTAAACGAT CCGCTAAGTA AATATGCTCC GCCAGGCGCA CGCGTGCCAA CCTACAATGG GACGCCCATT ACCCTAGTGA ATCTGGCAAC CCATACCAGC GCCCTGCCCC GTGAACAGCC CGGTGGCGCG GCACATCGTC CGGTGTTTGT CTGGCCAACG CGCGAGCAAC GCTGGAAATA CCTTTCTACG GCGAAGCTGA AAGCCGCGCC AGGCAGTCAG GCGGCGTACT CTAACCTTGC GTTCGACCTG CTGGCAGATG CACTGGCGAA TGCGTCCGGC AAGCCTTATA CCCAGTTGTT TGAAGAGCAG ATTACCCGTC CATTGGGGAT GAAAGACACC ACCTACACCC CCTCACCGGA TCAGTGCCGC CGTTTAATGG TTGCTGAGCG CGGTGCCAGT CCGTGCAATA ACACGCTGGC GGCAATTGGC AGCGGCGGCG TCTATTCCAC GCCTGGCGAT ATGATGCGCT GGATGCAGCA GTATTTATCA TCTGATTTTT ATCAGCGCAG TAACCAGGCA GATCGCATGC AGACGTTGAT TTATCAGCGC GCGCAGTTTA CCAAAGTGAT TGGCATGGAT GTCCCCGGCA AAGCGGATGC GCTTGGTTTA GGCTGGGTAT ATATGGCCCC GAAAGAGGGT CGTCCGGGGA TTATTCAGAA GACAGGCGGT GGTGGCGGTT TCATTACCTA TATGGCGATG ATCCCGCAGA AGAATATTGG CGCGTTTGTG GTGGTCACTC GTTCGCCGTT GACGCGCTTT AAAAATATGA GCGATGGCAT CAATGATCTG GTGACCGAGC TAAGCGGGAA TAAACCGTTG GTTATCCCTG CATCCTGA
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Protein sequence | MKRSLLFSAV LCAASLTSVH AAQPITEPEF ASDIVDRYAD HIFYGSGATG MALVVIDGNQ RVFRSYGETR PGNNVRPQLD SVVRIASLTK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA RVPTYNGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWKYLST AKLKAAPGSQ AAYSNLAFDL LADALANASG KPYTQLFEEQ ITRPLGMKDT TYTPSPDQCR RLMVAERGAS PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYQRSNQA DRMQTLIYQR AQFTKVIGMD VPGKADALGL GWVYMAPKEG RPGIIQKTGG GGGFITYMAM IPQKNIGAFV VVTRSPLTRF KNMSDGINDL VTELSGNKPL VIPAS
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