| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0132 |
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| Symbol | |
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| ID | 6273548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 84669 |
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| End bp | 86393 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641728775 |
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| Product | invasion plasmid antigen |
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| Protein accession | YP_001883166 |
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| Protein GI | 187734297 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 97 |
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| Plasmid unclonability p-value | 0.102369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA TCAACAATCA TTCTTTTTTT CGTTCCCTTT GTGGCTTATC ATGTATATCT
CGTTTATCGG TAGAAGAACA GTGTACCAGA GATTACCACC GCATCTGGGA TGACTGGGCT
AGGGAAGGAA CAACAACAGA AAATCGCATC CAGGCGGTTC GATTATTGAA AATATGTCTG
GATACCCGGG AGCCTGTTCT CAATTTAAGC TTACTGAAAC TACGTTCTTT ACCACCACTC
CCTTTGCATA TACGTGAACT TAATATTTCC AACAATGAGT TAATCTCCCT ACCTGAAAAT
TCTCCGCTTT TGACAGAACT TCATGTAAAT GGTAACAACT TGAATATACT CCCGACACTT
CCATCTCAAC TGATTAAGCT TAATATTTCA TTCAATCGAA ATTTGTCATG TCTGCCATCA
TTACCACCAT ATTTACAATC ACTCTCGGCA CGTTTTAATA GTCTGGAGAC GTTACCAGAG
CTTCCATCAA CGCTAACAAT ATTACGTATT GAAGGTAATC GCCTTACTGT CTTGCCTGAA
TTGCCTCATA GACTACAAGA ACTCTTTGTT TCCGGCAACA GACTACAGGA ACTACCAGAA
TTTCCTCAGC GCTTAAAATA TTTGAAGGTA GGTGAAAATC AACTACGCAG ATTATCCAGA
TTACCGCAAG AACTATTGAC ACTGGATGTT TCCAATAACC TACTAACTTC ATTACCCGAA
AATATAATCA CATTGCCCAT TTGTACGAAT GTTAACATTT CAGGGAATCC ATTGTCGACT
CGCGTTCTGC AATCCCTGCA AAGATTAACC TCTTCGCCGG ACTACCACGG CCCGCAGATT
TACTTCTCCA TGAGTGACGG ACAACAGAAT ACACTCCATC GCCCCCTGGC TGATGCCGTG
ACAGCATGGT TCCCGGAAAA CAAACAATCT GATGTATCAC AGATATGGCA TGCTTTTGAA
CATGAAGAGC ACGCCAACAC CTTTTCCGCG TTCCTTGACC GCCTTTCCGA TACCGTCTCT
GCACGCAATA CCTCCGGATT CCGTGAACAG GTCGCTGCAT GGCTGGAAAA ACTCAGTGCC
TCTGCGGAGC TTCGACAGCA GTCTTTCGCT GTTGCTGCTG ATGCCACTGA GAGCTGTGAG
GACCGTGTCG CGCTCACATG GAACAATCTC CGGAAAACCC TCCTGGTCCA TCAGGCATCA
GAAGGCCTTT TCGATAATGA TACCGGCGCT CTGCTCTCCC TGGGCAGGGA AATGTTCCGC
CTCGAAATTC TGGAGGACAT TGCCCGGGAT AAAGTCAGAA CTCTCCATTT TGTGGATGAG
ATAGAAGTCT ACCTGGCCTT CCAGACCATG CTCGCAGAGA AACTTCAGCT CTCCACTGCC
GTGAAGGAAA TGCGTTTCTA TGGCGTGTCG GGAGTGACAG CAAATGACCT CCGCACTGCC
GAAGCCATGG TCAGAAGCCG TGAAGAGAAT GAATTTAAGG ACTGGTTCTC CCTCTGGGGA
CCATGGCATG CTGTACTGAA GCGTACGGAA GCTGACCGCT GGGCGCAGGC AGAAGAGCAG
AAGTATGAGA TGCTGGAGAA TGAGTACTCT CAGAGGGTGG CTGACCGGCT GAAAGCATCA
GGTCTGAGCG GTGATACGGA TGCGGAGAGG GAAGCCGGTG CACAGGTGAT GCGTGAGACT
GAACAGCAGA TTTACCGTCA GTTGACTGAC GAGGTACTGG CCTGA
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| Protein sequence | MKPINNHSFF RSLCGLSCIS RLSVEEQCTR DYHRIWDDWA REGTTTENRI QAVRLLKICL
DTREPVLNLS LLKLRSLPPL PLHIRELNIS NNELISLPEN SPLLTELHVN GNNLNILPTL
PSQLIKLNIS FNRNLSCLPS LPPYLQSLSA RFNSLETLPE LPSTLTILRI EGNRLTVLPE
LPHRLQELFV SGNRLQELPE FPQRLKYLKV GENQLRRLSR LPQELLTLDV SNNLLTSLPE
NIITLPICTN VNISGNPLST RVLQSLQRLT SSPDYHGPQI YFSMSDGQQN TLHRPLADAV
TAWFPENKQS DVSQIWHAFE HEEHANTFSA FLDRLSDTVS ARNTSGFREQ VAAWLEKLSA
SAELRQQSFA VAADATESCE DRVALTWNNL RKTLLVHQAS EGLFDNDTGA LLSLGREMFR
LEILEDIARD KVRTLHFVDE IEVYLAFQTM LAEKLQLSTA VKEMRFYGVS GVTANDLRTA
EAMVRSREEN EFKDWFSLWG PWHAVLKRTE ADRWAQAEEQ KYEMLENEYS QRVADRLKAS
GLSGDTDAER EAGAQVMRET EQQIYRQLTD EVLA
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