Gene SbBS512_A0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0053 
Symbol 
ID6273429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand+ 
Start bp31873 
End bp32853 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content42% 
IMG OID641728718 
Productplasmid Partition par B protein 
Protein accessionYP_001883109 
Protein GI187734461 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones151 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACA GAAAGCACCG ACCGACTATT GGCCGTACGC TGAATACAAA TATCCTGAAT 
AATACTGAAG AAATATCGGC TCCAGTTCAT GTATTTACCC TCAATACTGG CCGAAAGGCA 
AAATTTACTG AGATCAAGGT TGATCATGAC AAAGTGGACA CTCAAACTTT TGTGGTTGAA 
GAGGTGAATG GCCGCGAACA GACAGCCCTG ACGCCGGACT CACTAAAAGA CATCACCAGA 
ACTATACGTT TACAACAATT CTATCCATGT ATTGGGATTC GGACTGGCGA TCTTATTGAG 
ATTTTGGATG GTTCCCGTCG TCGGGCAGCA GCTTTGCTAT GCAAGGTTGG ATTACGTGTA 
CTTGTAACGG ATGATGAGCT TACTGTTTCT GAAGCTCAGC ATCTGGCGAA AGATTTGCAG 
ACGTCACTTG AACATAATAT TCGTGAAATT GGGTTGCGTT TAGTACGTCT CAAAGAGGCC 
GGTATGAACC AGAAGCAAAT TGCGGAAAGA GAGGGATTGT CGGCAGCTAA GGTGACTCGT 
GCCCTCCAAG CAGCGTCCGT ACCTAAAGAT TTTGTGTCTC TTTTTCCTGT TCAGTCTGAG 
CTGACATACG CCGATTACAG GCAACTGGCT GAATTAAGTG AACGACTGAG GCTGGGTGAT 
ATATCTATTG ATGAAGTTGT GAAGAATATC TCGCCGAGTA TTGAGCTTAT TACTGCTGAT 
GACAATCTTT CTGAAGACGA GGTTAAAAAC AGTATTATGC GGCTTATAAC CAAGGAAATG 
TCTTCATTGC TTGATTCAGG AGTAAAGGAT AAAGCGGTTG TAACTTTGTT ATGGAAATTT 
GATAGTAAAG ATAAATTTGC TCGAAAACGA GTAAAGGGAC GTACGTTCTC ATATGAATTC 
GGCAGATTAC CGTTGGAAGT TCAGGATAAG TTAGATCGTA TGATTGCTCT TGTACTAAAA 
GATAATCTGA ATTCGCTGTG A
 
Protein sequence
MENRKHRPTI GRTLNTNILN NTEEISAPVH VFTLNTGRKA KFTEIKVDHD KVDTQTFVVE 
EVNGREQTAL TPDSLKDITR TIRLQQFYPC IGIRTGDLIE ILDGSRRRAA ALLCKVGLRV 
LVTDDELTVS EAQHLAKDLQ TSLEHNIREI GLRLVRLKEA GMNQKQIAER EGLSAAKVTR 
ALQAASVPKD FVSLFPVQSE LTYADYRQLA ELSERLRLGD ISIDEVVKNI SPSIELITAD 
DNLSEDEVKN SIMRLITKEM SSLLDSGVKD KAVVTLLWKF DSKDKFARKR VKGRTFSYEF 
GRLPLEVQDK LDRMIALVLK DNLNSL