Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2195 |
Symbol | rho |
ID | 5316922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 2277032 |
End bp | 2278348 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640780302 |
Product | transcription termination factor Rho |
Protein accession | YP_001317311 |
Protein GI | 150394636 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00569958 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAA GAGAACGTAC ATCTCCTCAG TATGAATCAT TCCACGAATT GTACAAGAAC TATACTACCA AGGAACTCAC TCAAAAAGCT AAAACTCTTA AGTTGACGAA CTATAGTAAA TTAAATAAAA AAGAACTTGT TCTAGCTATT ATGGAAGCAC AAATGGAAAA AGATGGTAAC TATTATATGG AAGGTATCTT AGATGATATA CAACCAGATG GTTATGGTTT TTTAAGAACA GTGAACTATT CTAAAGGGGA AAAAGATATT TATATATCTG CTAGCCAAAT TCGTCGTTTT GAAATTAAAC GTGGGGATAA AGTAACTGGG AAAGTTAGAA AACCTAAAGA TAACGAAAAA TATTATGGCT TATTACAAGT TGACTTTGTC AATGACCATA ACGCAGAAGA AGTGAAGAAA CGTCCGCATT TCCAAGCTTT GACACCACTT TATCCAGATG AGCGTATTAA ATTAGAGACA GAAACACAAA ATTATTCAAC GCGCATCATG GATTTAGTAA CACCGATTGG TTTAGGTCAA CGTGGTTTAA TAGTGGCGCC ACCTAAAGCA GGTAAAACAT CGTTATTAAA AGAAATAGCG AATGCAATCA GTACGAACAA ACCAGATGCA AAGCTATTTA TTTTGTTAGT TGGCGAGCGT CCTGAAGAGG TGACAGATTT AGAACGCTCA GTAGAAGCTG CTGAAGTCGT TCATTCAACG TTTGACGAAC CACCAGAACA CCATGTTAAA GTAGCTGAAT TATTACTTGA ACGTGCAAAG CGTTTAGTAG AAATTGGGGA AGATGTCATT ATTTTAATGG ATTCTATAAC GAGATTAGCA CGCGCTTATA ACTTAGTTAT TCCACCAAGT GGTCGTACAT TATCAGGTGG TTTAGATCCT GCATCTTTAC ACAAACCAAA AGCATTCTTC GGTGCAGCGA GAAATATTGA AGCGGGTGGA AGTTTAACAA TACTTGCAAC TGCATTAGTT GATACGGGTT CACGTATGGA CGATATGATT TACGAAGAAT TTAAAGGAAC AGGTAACATG GAGTTACATT TAGATCGTAA ATTGTCTGAA CGTCGTATCT TCCCTGCAAT TGATATTGGC AGAAGTTCAA CGCGTAAAGA AGAATTGTTA ATAAGTAAAT CTGAATTAGA CACATTATGG CAATTAAGAA ATCTATTCAC TGACTCAACT GACTTTACTG AAAGATTTAT TCGCAAACTT AAAAGGTCTA AGAATAATGA AGATTTCTTC AAGCAGCTAC AAAAGTCTGC AGAAGAAAGT ACTAAAACGG GTCGACCTAT AATTTAA
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Protein sequence | MPERERTSPQ YESFHELYKN YTTKELTQKA KTLKLTNYSK LNKKELVLAI MEAQMEKDGN YYMEGILDDI QPDGYGFLRT VNYSKGEKDI YISASQIRRF EIKRGDKVTG KVRKPKDNEK YYGLLQVDFV NDHNAEEVKK RPHFQALTPL YPDERIKLET ETQNYSTRIM DLVTPIGLGQ RGLIVAPPKA GKTSLLKEIA NAISTNKPDA KLFILLVGER PEEVTDLERS VEAAEVVHST FDEPPEHHVK VAELLLERAK RLVEIGEDVI ILMDSITRLA RAYNLVIPPS GRTLSGGLDP ASLHKPKAFF GAARNIEAGG SLTILATALV DTGSRMDDMI YEEFKGTGNM ELHLDRKLSE RRIFPAIDIG RSSTRKEELL ISKSELDTLW QLRNLFTDST DFTERFIRKL KRSKNNEDFF KQLQKSAEES TKTGRPII
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