Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_2101 |
Symbol | |
ID | 5316076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 2175037 |
End bp | 2176260 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640780204 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001317218 |
Protein GI | 150394543 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.239154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTT TTAGTGAAAA AGAAAAAATT CAATTACTAG CAGATATTGT TGAACTACAA ACTGAAAATA ATAATGAAAT AGACGTTTGT AATTATTTAA AAGATTTATT CGACAAGTAC GATATTAAAT CTGAAATTTT GAAAGTTAAT GAACACCGCG CCAATATCGT TGCAGAAATC GGTAACGGCT CACCTATACT CGCATTGAGT GGTCATATGG ATGTTGTTGA TGCAGGAAAT CAAGATAATT GGACTTATCC CCCTTTTCAA CTCACAGAAA AAGCTGGCAA ATTATACGGT CGAGGCACAA CGGATATGAA AGGCGGTCTG ATGGCTTTGG TCATCACACT CATTGAATTA AAAGAACAAA ATCAATTGCC TCAAGGAACG ATAAGATTAC TAGCTACTGC TGGCGAAGAG AAAGAACAAG AAGGTGCCAA ATTATTGGCT GATAAAGGCT ATTTAGACGA TGTAGATGGC TTAATTATTG CTGAACCAAC TGGATCTGGA ATTTATTATG CACATAAAGG GTCTATGTCA TGTAAAGTAA CTGCAACTGG CAAAGCTGTC CATAGCTCAG TTCCATTTAT TGGTGACAAT GCAATTGATA CACTGCTTGA ATTTTATAAT CAATTTAAAG AAAAATATTC AGAGCTTAAA AAACATGATA CTAAACATGA ATTAGATGTT GCACCCATGT TCAAATCATT GATAGGAAAA GAAATTTCTG AAGAGGATGC AAATTATGCA TCTGGTCTTA CAGCTGTATG TTCGATTATA AATGGCGGCA AACAATTTAA CTCTGTACCA GATGAAGCTT CACTTGAATT TAACGTAAGA CCAGTTCCTG AGTATGATAA CGACTTTATA GAATCGTTTT TCCAAAATAT CATTAATGAT GTGGATAGCA ATAAGCTTTC ACTCGATATT CCAAGCAATC ACCGACCTGT AACAAGCGAT AAAAATAGCA AATTAATTAC TACGATTAAA GATGTAGCTT CTAGTTATGT AGAACAAGAC GAAATATTTG TTTCAGCGCT TGTAGGTGCA ACAGATGCCT CTAGTTTCTT AGGAGATAAT AAGGACAATG TTGATTTAGC CATTTTTGGA CCAGGTAATC CATTAATGGC ACATCAAATC GATGAATATA TTGAAAAAGA TATGTACCTG AAATATATTG ATATTTTTAA AGAGGCTTCC ATTCAATATT TAAAAGAGAA ATAA
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Protein sequence | MTTFSEKEKI QLLADIVELQ TENNNEIDVC NYLKDLFDKY DIKSEILKVN EHRANIVAEI GNGSPILALS GHMDVVDAGN QDNWTYPPFQ LTEKAGKLYG RGTTDMKGGL MALVITLIEL KEQNQLPQGT IRLLATAGEE KEQEGAKLLA DKGYLDDVDG LIIAEPTGSG IYYAHKGSMS CKVTATGKAV HSSVPFIGDN AIDTLLEFYN QFKEKYSELK KHDTKHELDV APMFKSLIGK EISEEDANYA SGLTAVCSII NGGKQFNSVP DEASLEFNVR PVPEYDNDFI ESFFQNIIND VDSNKLSLDI PSNHRPVTSD KNSKLITTIK DVASSYVEQD EIFVSALVGA TDASSFLGDN KDNVDLAIFG PGNPLMAHQI DEYIEKDMYL KYIDIFKEAS IQYLKEK
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