Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0821 |
Symbol | |
ID | 5316933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 882547 |
End bp | 884919 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640778907 |
Product | ribonuclease R |
Protein accession | YP_001315964 |
Protein GI | 150393289 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA AGCAATCAAT AGAAGAGATT ATTAATCAAC CTGAATATGA ACCTATGTCA GTGTCAGATT TTCAAGATGC ATTAGGTTTA AGTAGTGCCG ACTCATTTAG AGATTTAATT AAGGTGCTCG TAGAATTAGA ACAATCAGGA TTAATTGAAC GTACAAAAAC AGACAGATAT CAAAAAAAGC ATAGTTCAAA AGGTCATTCA AAATTGATAA AGGGAACGTT AAGTCAAAAT AAAAAAGGCT TTGCATTCTT AAGACCTGAA GATGAGGATA TGGAAGATAT ATTTATTCCC CCAACAAAAA TTAATCGTGC CTTAGATGGA GATACTGTAA TTGTAGAAAT ACATCAATCT AAAGGTGAAC ATAAAGGTAA AATTGAAGGG GAAGTTAAGT CGATTGAGAA GCATTCAGTA ACTCAAGTTG TTGGTACGTA TAGTGAAGCT AGACATTTCG GATTTGTTAT TCCAGATGAT AAACGTATTA TGCAAGATAT TTTCATTCCT AAAGGACAAA GTTTAGGTGC AGTAGATGGG CATAAGGTAC TTGTTCAAAT TACTAAATAT GCTGATGGTT CAGATAATCC AGAAGGACAT ATTTCTGCTA TTTTAGGACA TAAAAATGAT CCTGGCGTAG ATATTTTATC TATTATCTAT CAACATGGCA TAGAAATTGA ATTTCCTGAT GAAGTGTTAC AAGAAGCTGA AGCAGTACCT GATCATATTG AAAATACTGA AATTAAAGGC CGTCATGATT TACGTGATGA ATTGACAATC ACAATTGATG GTGCTGATGC TAAAGACTTA GATGACGCAA TTAGTGTTAA AAAGTTAGCG AACGGTAATA CGCAGTTGAC TGTAAGTATT GCTGATGTCA GTTATTATGT AACTGAAGAT TCAGCTTTAG ATAAAGAAGC TTATGATAGA GCGACAAGTG TATATCTTGT TGACCGTGTG ATTCCGATGA TTCCACATCG ATTAAGCAAT GGTATTTGTT CATTAAATCC TCATGTTGAT CGTTTAACGT TAAGCTGTCG CATGGAAATC GATGCTAGTG GTCGCGTTGT TAAACATGAA ATTTTTGATA GTGTTATACA TTCTGATTAT CGAATGACGT ATGATGCGGT AAATCAGATT ATTACTGAAA AGGATCCTAA CATTCGCGAA CAATATAAAG AAATTACGCC TATGTTAGAT TTAGCACAAG ATTTATCTAA TCGTTTGATT CAAATGAGAA AACGACGTGG TGAAATCGAT TTTGATATTA GTGAAGCAAA AGTATTAGTT AACGAAGTCG GTATACCAAC AGATGTTCAA TTAAGACAAC GTGGCGAGGG TGAACGTCTA ATTGAATCAT TTATGTTAAT TGCAAATGAA ACAGTTGCTG AACATTTTAG TAAGTTAAAT GTACCTTTTA TTTACCGAGT GCATGAGCAA CCTAAATCAG ATCGCTTAAG ACAATTCTTT GATTTTATTA CAAACTTTGG CATCATGATT AAGGGCACTG GCGAAGATAT TCATCCAACA ACACTTCAAA AGGTTCAAGA AGAAGTAGAA GGTCGACCTG AACAAATGGT CATTTCAACA ATGATGTTAC GTTCAATGCA ACAAGCGCAT TATGATGATG TGAACTTGGG ACATTTTGGC TTATCAGCTG AATATTATAC GCATTTTACA TCACCAATTA GACGTTATCC TGATTTAACA GTTCATCGTT TAATCCGTAA GTATTTAATT GAGAAATCAA TGGATAACAA AGAAGTGAAG CGTTGGGAAG ACAAATTGCC TGAGTTAGCT GAACATACTT CTAAACGTGA ACGTCGTGCT ATTGAGGCAG AACGTGATAC TGATGAATTG AAAAAAGCAG AATATATGAT TCAACATATT GGTGATGAAT TTGAAGGTAT TGTCAGCTCA GTAGCTAACT TCGGTATGTT CATTGAATTG CCAAATACGA TAGAAGGTAT GGTTCATATT GCGAATATGA CTGATGATTA TTACCGTTTT GAAGAGCGTC AAATGGCATT AATTGGTGAG CGTCAAGCTA AAGTATTTAG AATTGGTGAC ACAGTTAAGG TTAAAGTGAC GCATGTTGAT GTAGATGAAC GATTAATTGA TTTTCAAATT GTTGGAATGC CTTTACCTAA AAATGACCGC TCACAGCGAC CAGCAAGAGG TAAAACGATT CAAGCTAAAA CGCGTGGCAA ATCTTTAGAT AAATCGAAAT CTGATGATAA GGGTCGTAAG AAAAAAGGTA AGCAACGTAA AGGTAAAAAC CAACGTAATA ATGATAAATC AGGTAATAGT AAGCATAAGC CATTTTATAA AGATAAAAGT GTGAAAAAGA AAGCACGTCG TAAGAAAAAA TAA
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Protein sequence | MNLKQSIEEI INQPEYEPMS VSDFQDALGL SSADSFRDLI KVLVELEQSG LIERTKTDRY QKKHSSKGHS KLIKGTLSQN KKGFAFLRPE DEDMEDIFIP PTKINRALDG DTVIVEIHQS KGEHKGKIEG EVKSIEKHSV TQVVGTYSEA RHFGFVIPDD KRIMQDIFIP KGQSLGAVDG HKVLVQITKY ADGSDNPEGH ISAILGHKND PGVDILSIIY QHGIEIEFPD EVLQEAEAVP DHIENTEIKG RHDLRDELTI TIDGADAKDL DDAISVKKLA NGNTQLTVSI ADVSYYVTED SALDKEAYDR ATSVYLVDRV IPMIPHRLSN GICSLNPHVD RLTLSCRMEI DASGRVVKHE IFDSVIHSDY RMTYDAVNQI ITEKDPNIRE QYKEITPMLD LAQDLSNRLI QMRKRRGEID FDISEAKVLV NEVGIPTDVQ LRQRGEGERL IESFMLIANE TVAEHFSKLN VPFIYRVHEQ PKSDRLRQFF DFITNFGIMI KGTGEDIHPT TLQKVQEEVE GRPEQMVIST MMLRSMQQAH YDDVNLGHFG LSAEYYTHFT SPIRRYPDLT VHRLIRKYLI EKSMDNKEVK RWEDKLPELA EHTSKRERRA IEAERDTDEL KKAEYMIQHI GDEFEGIVSS VANFGMFIEL PNTIEGMVHI ANMTDDYYRF EERQMALIGE RQAKVFRIGD TVKVKVTHVD VDERLIDFQI VGMPLPKNDR SQRPARGKTI QAKTRGKSLD KSKSDDKGRK KKGKQRKGKN QRNNDKSGNS KHKPFYKDKS VKKKARRKKK
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