Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0554 |
Symbol | |
ID | 5317801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 596512 |
End bp | 597894 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640778641 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001315699 |
Protein GI | 150393024 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAACA CTTTATACCA TCAACTTTAT GAAAAATTAA AAAAACAAAT AATTGAAGGT CAATTTAAAG AAGGCGATAA ATTTTATTCT AAAAGACAAT TAAGCAAACA TTTATCTATC AGCCAAACAA CCGTAGAGCA TGCATATCAA CTTCTATTAG ACGAAGGTTA CATTTATTCA AGACCTCGCT CTGGATATTT TGTGTCCGAA ATTGAATCTT TAACAATTTT AAACAATCAA CCTATCCCCT CTCTTTTTGA TGATGATTCA TATAAACCAA AAGCGAGTGA TGAAGCTTAT GATTATGCTT TTAATTTGGA TGAAATAGAT ACGAAACATT TCCCTATAGA ACTTTTCAGA AAGTATTCCA AAGATCTTTA TGATACAAAT CATTTAAATC AATTACGTAG AGGACATTTT CAAGGAGAAT TACATTTAAG ATTTCAACTG GCATTTTATT TATTTACTAA TCGTGGTGTA ATTTGTGATC CTAATCAAAT TATAATTGGC TCATCTACCG AACAATTAGT AAATCAATTA GTCGATTTAC TTTATACTTC AACGTTTATT ATCGAAAAAC CTAGTTATCC ACCAATCAAA AATATTTTAG ATAAAAAACA AGTTGAATAT GAACAAATTG AAGTTGAAGA TAATGGAATA AACGTAGATG AAGTTATTAA ATCACAAAAA AATATAGTAT ATATAACGCC TTCCCATCAA TTTCCAACTG GATATGTGAT GGACTTAAAA AAACGAACTC AATTAATACA ATGGGCTCAA GAAAAAGAAG AACGATTTAT TATAGAAGAT GATTATGATT CCGAGTTTAG ATATTTCGGC AAACCCATTC CAGCAATTCA AGGTCTATAT TCAAGAGGAG AAAAAGTGAT TTATATCAGT ACATTTTCAA AGTCTATTTT TCCTAGCTGT CGAGTTGCAT ATATGGTGTT ACCCTATTCT ATAATGAAAA AATATCATTC TCAAAATCAC ATTGAAGGCA ACACTGTACC TGTTCATATG CAAAACCTTA TTGCAACGTT TATATCTTCC GGTGGTTTTG AAAGGCATTT AAATAAAATG AGACGAATTT ATCGTAGAAA ACTAACCTAT ATTTTAAAAA GATTGAAACC TTACAAAGAG CAGCTTGATA TTCAAGGTGC TGAAACGGGT ATGCATTTTA CAATTACAGT AAAAAATGGA TTAACATTAC AAGAGTGTCT TGATAGAGCA AACAAAGTAA AGTTAAAATT ACAAGTTTAT AATTTTGATG ATGATCAAGA CTATAAGAAA ACCCCTAAAT TTATATTAGG CTTTGGCGGT ATAGACGATG ATGCTTTAAA ACCGCATGTA GACGCTCTAA TAAAATCATT AATTATAAAG TAA
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Protein sequence | MKNTLYHQLY EKLKKQIIEG QFKEGDKFYS KRQLSKHLSI SQTTVEHAYQ LLLDEGYIYS RPRSGYFVSE IESLTILNNQ PIPSLFDDDS YKPKASDEAY DYAFNLDEID TKHFPIELFR KYSKDLYDTN HLNQLRRGHF QGELHLRFQL AFYLFTNRGV ICDPNQIIIG SSTEQLVNQL VDLLYTSTFI IEKPSYPPIK NILDKKQVEY EQIEVEDNGI NVDEVIKSQK NIVYITPSHQ FPTGYVMDLK KRTQLIQWAQ EKEERFIIED DYDSEFRYFG KPIPAIQGLY SRGEKVIYIS TFSKSIFPSC RVAYMVLPYS IMKKYHSQNH IEGNTVPVHM QNLIATFISS GGFERHLNKM RRIYRRKLTY ILKRLKPYKE QLDIQGAETG MHFTITVKNG LTLQECLDRA NKVKLKLQVY NFDDDQDYKK TPKFILGFGG IDDDALKPHV DALIKSLIIK
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