Gene Saro_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3920 
Symbol 
ID5077404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp87740 
End bp88582 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID640481027 
ProductTOPRIM domain-containing protein 
Protein accessionYP_001165689 
Protein GI146275528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTCA TCAGCAATCA CCCTACATCG GATCTCCGAA CCCTCGTCGC CCGCCTAGGT 
GGCAAGTGGA CGGGCAACAC CGCGATGTGT CGTTGCCCGT CCCATGCAGA CCGAACGCCG
TCACTGGCGA TCAGGCAAGG CGATCGCAGC ATCCTCGTGA CCTGCCATGC CGGTTGTGAT
GCTACCGATG TTCTTCGAGC GCTTCGCAGG ATCGCCGACC TGCCAAGCGT TGGCCCCGCT
GAGGTAGTTG GCAGACAGGC TCACCAGCCA TCAGCCTTTC TTGCGATTTG GCAGGCAGCT
CGTCAGATCG AGGGCACGCT GGCCGAGCGC TATGTCCGCG AAGTCCGCAA CGTCTGGGCA
CCGCTTGAAG ACCTGCGATT TCATCCGCGC TGTCCGAAAG GGCAGGGGAG GCTCGTTCAG
TTTGAGCCAG CCTTGCTGGT CGCGATGCGC AAGGCGGGCG AGATCGTCGC GATCCAGCGG
ATATTCCTCG ATCCAACGAC GGCCCACTAC ACCGAGAAGC TCGTCCTCGG GCGAGCGATC
GGCGCTGCCT GGACCAACGG ACCACCGGGC AAAACGATTG GCCTCTGCGA GGGCTTCGAG
ACTGCCGCGG CATACACCTC ACTGACCGGC ATCCAGGCAT GGGCCACCAT GGGCGCCAAG
CGCTTCCACC AGGTCGAGAT CCCGGCCAGC GTTGAGCGCG TGTTCCTGCT TGCTGACAAC
GACCCTGAAG GCCGCCGCGC CGAAGCCCGT GCGCGGCAAG CATTGGCCCG ACCGGGCCTT
GCGATCAACA CCGAGTGGCC ACCGGGACGC ATGAACGACT GGGCGCAGCT CCTGAAGCGC
TGA
 
Protein sequence
MPLISNHPTS DLRTLVARLG GKWTGNTAMC RCPSHADRTP SLAIRQGDRS ILVTCHAGCD 
ATDVLRALRR IADLPSVGPA EVVGRQAHQP SAFLAIWQAA RQIEGTLAER YVREVRNVWA
PLEDLRFHPR CPKGQGRLVQ FEPALLVAMR KAGEIVAIQR IFLDPTTAHY TEKLVLGRAI
GAAWTNGPPG KTIGLCEGFE TAAAYTSLTG IQAWATMGAK RFHQVEIPAS VERVFLLADN
DPEGRRAEAR ARQALARPGL AINTEWPPGR MNDWAQLLKR