| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3651 |
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| Symbol | |
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| ID | 5077799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009427 |
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| Strand | + |
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| Start bp | 280481 |
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| End bp | 282142 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481374 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001166036 |
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| Protein GI | 146275876 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGG CAGCGGGCGA GTTCGACTTC ATCGTAATCG GCGGCGGCAG CGCGGGGGCG
GTGCTCGCCG CCCGCCTGTC GGAAGACGCG CAAAGCAGGG TCCTTCTGCT CGAGGCGGGC
GGTGCCAACA CCTCGCTGCT GGTGCGCATG CCCGCTGGCG TCGGCACGCT GATCAAGAAG
AAAAGCCGCC ACAACTGGGG CTTCTGGTCC GACCCCGAAC CCCACATGGA CGGGCGCCGC
ATGTGGCATC CAAGGGGGCG CGGGCTGGGC GGCTCCTCGG CGATCAACGG GATGGTCTAT
ATTCGCGGCC ACGCGCGCGA TTACGACCAG TGGCGGCAGA TGGGCCTCGA AGGCTGGTCC
TTCGCCGAGG TCCTGCCCTA TTTCCGCCGC GCCGAGGACT TCTGCGACGG TGCGGATGCC
TTCCACGGCG CGGGCGGCCC CTTGCGGGTA AGCTGGGGCG AGCGCTCGGA CCACCCGCTC
TATCGCGGCG TGATCGAGGC AGGCCGCCAG GCCGGGCACA AGGTCACCCC CGATTTCAAT
GGCGCTGACC AGGAAGGCTT TGGTCGCTAC CAGCTCACCA TCCACGATGG CGAGCGGTGG
AGCGCCGCGC GCGGCTATCT CGCGCCGGTC GCGGGGCAGC GGGCGAACCT CACGATCGTC
ACCGGGGCGC GCGTCCACCG TGTCGTGGTC GAGGGCGGAC GCGCCACCGG CGTCGAGTAC
AGCCTTGGCA AGGGCAAGCC GGTGCGCCGC GCCCATGCCG CGCGCGAAGT GCTGGTCTGT
GCGGGTGCCC TGCAATCGCC GCAGATCCTG CAGCTTTCGG GGATCGGCGA TCCGGAGGAA
CTGGCAAGGC ATGGTATCGC GCCGGTCCAT CCCCTGCCCG GCGTGGGGGC CAATCTCCAG
GACCACCTCG ACGTAACGCT CAACTGGGCC TGCACGCAGC CGATCACGAT CTACAACGAG
ATCAAGGGGT TGGGCCAGCT CAAGGTCGGC CTGCAATACC TGCTGACCGG CAAGGGCGCG
GGACGGCAGA ACGGGCTTGA GGCGGGAGCC TTCCTCAAGT CGCGGCCCGA TCTCGACCGT
CCGGACCTCC AGATCCACTT CGTGCTGGCC ATCATGCAGG AACACGGCAA GCGTTCGGTC
AAGCGCGACG GGTTCACGCT CCACGTCTGC CAGCTCCGGC CAGAAAGCCG GGGGCGGGTA
TCGCTCGCCT CGGCGGACCC ATATGCCGAT CCCTCGATCC TGGCGAATTT CATGGCCGCC
GAGGAAGACC GCCGCGCTGT CCGCGCGGGC ATCCGCATCG CGCGCGAGGT GGCGGCGCAG
CCTGCGCTTG CACCCTATCG CGGCGAGGAG ATCTGGCCGG GCAACGACGT GCAGACCGAC
GAAGAGATCG ACGCCTGGGT GCGCCGCACC GGCGAGACGA TCTATCACCC TGTCGGCACT
TGCCGCATGG GCACGCAAGG CGATGCGATG GCGGTGGTCG ACAGCCAGTG CCGCGTCATC
GGCCTTGAAG GGCTGCGCGT GGTCGATGCA TCGGTCATGC CGAACCTGAT CGGCGGAAAC
ACCAACGCGC CCACGATCAT GATCGCCGAA AAGATCTCCG ACGCGATCCG GGGCAGGGCA
CCGCTTGCGC CGGTCGAGAC GAGGACGGTG GACTTCGTCT GA
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| Protein sequence | MAEAAGEFDF IVIGGGSAGA VLAARLSEDA QSRVLLLEAG GANTSLLVRM PAGVGTLIKK
KSRHNWGFWS DPEPHMDGRR MWHPRGRGLG GSSAINGMVY IRGHARDYDQ WRQMGLEGWS
FAEVLPYFRR AEDFCDGADA FHGAGGPLRV SWGERSDHPL YRGVIEAGRQ AGHKVTPDFN
GADQEGFGRY QLTIHDGERW SAARGYLAPV AGQRANLTIV TGARVHRVVV EGGRATGVEY
SLGKGKPVRR AHAAREVLVC AGALQSPQIL QLSGIGDPEE LARHGIAPVH PLPGVGANLQ
DHLDVTLNWA CTQPITIYNE IKGLGQLKVG LQYLLTGKGA GRQNGLEAGA FLKSRPDLDR
PDLQIHFVLA IMQEHGKRSV KRDGFTLHVC QLRPESRGRV SLASADPYAD PSILANFMAA
EEDRRAVRAG IRIAREVAAQ PALAPYRGEE IWPGNDVQTD EEIDAWVRRT GETIYHPVGT
CRMGTQGDAM AVVDSQCRVI GLEGLRVVDA SVMPNLIGGN TNAPTIMIAE KISDAIRGRA
PLAPVETRTV DFV
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