Gene Saro_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3553 
Symbol 
ID5077702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009427 
Strand
Start bp169593 
End bp170372 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID640481277 
ProductPGAP1 family protein 
Protein accessionYP_001165939 
Protein GI146275779 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGCCG CCGCGCAAAC CACTCCCGAA ATCCGCCGCC CCCAGCTTGG CTGGACCATG 
CTGGAGACCC CCCGTTTTCT CAGCGAGACG GCGTTGCTGG CGCTCGCCTG GCCCATGCTG
GCCAAGGCGC CGCAGGGCGA TGGGCACCCG GTCATGGTCC TGCCCGGCTT CGCCACCAAC
GACACGATGA CCGTGCTGCT GCGCTCGTTC CTCGCTAGGC TCGGCTACCA GGTCTTCCCG
TGGGACCTTG GCTGGAATCT CGACCAGCAT TCGGCGGGCG AGAACGGCGA ACACCTTGCC
GCGCGCATCG ATGCCATCGC TGCCGAGACC GGCCGCAAGG TCAGCCTTGT CGGGTGGAGC
CTTGGCGGGG TCATCGCGCG CGAGGCGGCG CGGCGCGATC ATGGCGGCCT GCGTCAGGTG
GTCACCCTCG GCAGCCCCTT CACCGGCAAT CCGCGCGCGA CCAGCCTCAC CTCGCTCTAC
GAACTGCTGA CCGGCAACAA GGCGTCGTCC GAAAAGTCCG CTGCCCGCTA TGCCAGGGGC
CATCACCCGC TGCCCGTCCC CTCGACCGCG ATATTTTCCC GCACGGATGG CATCACCGCC
TGGGAGAACT GCGTGAGCGA GACCGACGAC AGGACCGAGA ACATCGAGGT GCATTGCAGC
CACTTCGGCT TCGTCGCCAA CCCCGGCGTG TTCTGGGCCG TGGCCGACCG GCTCGCCCAG
CCCGAAGGCC AGTGGCGCAA GTTCGACCCC AAGGGATGCT TCGCCGCGTT CTATCCCTGA
 
Protein sequence
MNAAAQTTPE IRRPQLGWTM LETPRFLSET ALLALAWPML AKAPQGDGHP VMVLPGFATN 
DTMTVLLRSF LARLGYQVFP WDLGWNLDQH SAGENGEHLA ARIDAIAAET GRKVSLVGWS
LGGVIAREAA RRDHGGLRQV VTLGSPFTGN PRATSLTSLY ELLTGNKASS EKSAARYARG
HHPLPVPSTA IFSRTDGITA WENCVSETDD RTENIEVHCS HFGFVANPGV FWAVADRLAQ
PEGQWRKFDP KGCFAAFYP