Gene Saro_3190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3190 
Symbol 
ID3917448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3409927 
End bp3410718 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID640445974 
Productexodeoxyribonuclease III 
Protein accessionYP_498459 
Protein GI87201202 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCGG TTGCCACATG GAACATCAAT TCGGTCCGCT TGCGCGCCGA TCAGGTAGAA 
CGCTTCCTGT TGCAGGAGGC ACCCGACGTG CTCTGCCTGC AGGAGATCAA GTGCGCGGAG
AGCGTGTTTC CGCACGAGGT GTTCGAGAAG CTCGGCTATA CCCACCGCGC GATTCACGGG
CAGAAGGGCT ACCACGGCGT CGCCACGGTC AGCCGCATCC CCTTCCGCGA TTTCAGCAGG
CATGACTGGC AGGACAATGG CGAGGCCCGG CACATCGGGG TCGAACTGCT GGGGCCGGGC
AACGGACTGA TTCTCGAGAA CGTCTACATC CCGGCAGGCG GCGACGTGGC CGACCGCGAG
GTGAACCCCA AGTTCGGGCA GAAGCTCGAC TTCCTCGAGC GCATGACCCG CTGGGCCGAG
AAGATCGAGC GCCCGACGCT GATCGTCGGC GACTTCAACA TCGCGCCGCT GGAATGCGAC
GTCTACGACC ACAAGGCCCT GCTCAAGGTC GTCAGCCACA CGCCGCTTGA AGTCGAGACG
CTTCAGCGCT TTGCCGATGC CCACGGCTGG GTCGACCTTG GCCGCAAGCA TATCCCCGCG
CCGGAGCGCA ACTATTCCTG GTGGTCTTAC CGCTCCTACT GGCGCGCCAA GGACCAGGGC
CGGCGCCTCG ACCACATGTG GGCCTCGCCC GAAGCAGCCG CACAGACCCG CGGGCACCGC
TTCGTCGAGG AGACGCGCAA GTGGGACCAG CCTTCGGACC ACATACCGCT GATCACCGAG
CTGGATCTGT GA
 
Protein sequence
MISVATWNIN SVRLRADQVE RFLLQEAPDV LCLQEIKCAE SVFPHEVFEK LGYTHRAIHG 
QKGYHGVATV SRIPFRDFSR HDWQDNGEAR HIGVELLGPG NGLILENVYI PAGGDVADRE
VNPKFGQKLD FLERMTRWAE KIERPTLIVG DFNIAPLECD VYDHKALLKV VSHTPLEVET
LQRFADAHGW VDLGRKHIPA PERNYSWWSY RSYWRAKDQG RRLDHMWASP EAAAQTRGHR
FVEETRKWDQ PSDHIPLITE LDL