Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2183 |
Symbol | |
ID | 3918848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2324303 |
End bp | 2325931 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640444938 |
Product | TrwC protein |
Protein accession | YP_497456 |
Protein GI | 87200199 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.964158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCGG TAGCCAATGT CCGCACCGCC GGCGGGGCGG CCAACTACTT CGCTGCCGAC AATTACTACA CGCGGGCTGA TGCCGATCGC TCGGGTGAAT GGCTGGGCAA CGGCGCTGCC GCGCTCGGGC TCAAGGGGGC CGTCGACGCG CGGCAATTCG AGGCGGTCCT TAAGGGACTG CTGCCCGATG GTAGCCGCGT CGGCAGTGAC AACCGGGCGC ACCGGGCGGG GACCGATCTC ACCTTTTCGA TGCCGAAAAG CTGGTCGGTC CTTGCTCTGG TGGGCGGCGA CAAGAGGATC CTCGATGCCT ACGCCGCGGC TGTCCGGGAA ACCCTGCGCT GGGCCGAGAA GAACCTTGCC GAGACCCGGA TGGAGGTTCG GGGCAGAGAG CGTGCGGTCC AGACCGGCAA CCTTGCGATC GCGCTCTTCC AGCACGACAC CAACCGCAAC CAGGAGCCCA ACGCCCACTT CCATGCCGTC ATTGCCAATG TGACGAGAGG GGCCGATGGC AAATGGCGGG CGCTGCGCAA TGACAAGCTC TGGCAGCACA ATACTTTGCT CAATGCCATG ACGATGGCGC GGTTTCGTCT GAGCGTCGAG AAGCTCGGCT ACGAGGTCGG GGAGTTCGGC AAGCACGGCA ATTTCGAGGC CGTCGGTGTG CCCAAAGACG TGCGCGATGC CTTCAGTTCG CGGCGGGCGG AGATTCTCGA CCGCCTGGCA ACGATGGAAG GAAGGGGGCT CGCTGCTCGC AACGCAGCAA ACCTCATGAC CCGGGCAGAC AAGGGGCGGA TCGAGGATCG CGATGCGCTG CGGCAGCAGT GGCGGGATAC GTCCACAAGG CTGGGCTTTG ACCCCGCCAT GGTCATTGCC CGGTCCAATG CTCGCAGCGC GCAGGACCTT GGCAATTTGA CTGGCGTTGG GTCCACGATG CGCGCGATAG TCCGCAATGC TCAGGCCCTT GCAACCTCCT TGGCCGAGCG CCTCGGCCTG CGGGAAGGCG ACCCGCTGAT ACCGGCCCGG CTGACCAATC GCAGTGTCGA GCAGGTCGCT GCAATTCATG CAGTCGCCTC GGCTGTGCGG CATCTGGGCG AGCGGGAGGC GGCCTTCACC CGGGCCGAAA TCTACCGTGC AGCGCTTGGC TTTGCGCTCC CAACCTCGCT CGCTGACATC GAGCAGCGCG TCGACCAGCT GCTCCGCCAG GGACATCTGG AGAAGGGCAG GGGTGCCGAC CGGGAACTGC TGACGACACG CGATGCCATC AGTCTCGAAC AGCGCATCAT CGCCGGGGTT GAAGACGGGC GCGGCACCGC GCCGGCGATT GTTTCTCCCG ACATTGCCGG GTCCCGGCTG CAGGCCCTGT CCCAGATCAA ATACGGGCTC ACCTTGAACG CTGGACAGGA AGGGGCAGGG CGCCTGCTGC TTGGCTCGAA CAACCGGATC GTCGCGATCC AGGGCGTCGC GGGCGCAGGC AAGAGCACGG TCCTCAAACC TGTCGCCGAT ATCCTGCGCG AGGAGGGCAG GAGTGTGCTC GGGCTGTCGA AGCCGCCGCA GCCTGGTTGT CGCTTTCGAC AGCCGAGCGC GAGGCAACCG CGATTTATGC CTCAGGCCGA AACTTGCGCA GCGCCGTGA
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Protein sequence | MLSVANVRTA GGAANYFAAD NYYTRADADR SGEWLGNGAA ALGLKGAVDA RQFEAVLKGL LPDGSRVGSD NRAHRAGTDL TFSMPKSWSV LALVGGDKRI LDAYAAAVRE TLRWAEKNLA ETRMEVRGRE RAVQTGNLAI ALFQHDTNRN QEPNAHFHAV IANVTRGADG KWRALRNDKL WQHNTLLNAM TMARFRLSVE KLGYEVGEFG KHGNFEAVGV PKDVRDAFSS RRAEILDRLA TMEGRGLAAR NAANLMTRAD KGRIEDRDAL RQQWRDTSTR LGFDPAMVIA RSNARSAQDL GNLTGVGSTM RAIVRNAQAL ATSLAERLGL REGDPLIPAR LTNRSVEQVA AIHAVASAVR HLGEREAAFT RAEIYRAALG FALPTSLADI EQRVDQLLRQ GHLEKGRGAD RELLTTRDAI SLEQRIIAGV EDGRGTAPAI VSPDIAGSRL QALSQIKYGL TLNAGQEGAG RLLLGSNNRI VAIQGVAGAG KSTVLKPVAD ILREEGRSVL GLSKPPQPGC RFRQPSARQP RFMPQAETCA AP
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