| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2118 |
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| Symbol | |
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| ID | 3917766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2256144 |
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| End bp | 2257658 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640444871 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_497391 |
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| Protein GI | 87200134 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACG TCAGGATACT TTCTCTCGCC CTGCTGCTGT CCGCCTGCGG AACCGATACG
GCCGACCGCG TGGCCCGGGC CCGCTCGGAG ATCGCCGGGA TGGAACTGGC CGCGGCCCGC
GTCGATCTGG CGGCGGCGCT TGCCGAGCGG GGCGACGATG CCGAACTGCT GCGGTTGCTG
GCCTCGGTGC AACTGCGCCT CGGCGACGGG GACGGGGCGG AAGCCACGGC GGCAAGGCTG
GAACGGACCG GGGCAACGGG CGCGGAACTC GCGCGCATGA GAGCTGAAGC CGCACTGCTG
CGCGGCCGTG CACGGGAAGC GCTGGCGCTT CTGGGCAACG ATGCCACGAC TGGCGGCTGG
CGGGTGAGGG CCGCCGCGCT TTCCGCAGTG GGCGACGGGG AGGGAGCATT CAGGGCGCTG
CAATCGGGTC TTGCCGCAGG GTCCGATCCG CTACTGCTGC GCGACATGGC GCGGTTCCTG
ATCGATGCGC AGGACCTTGA TGGCGCACAG CGGCAGGTGG ATGCGCTGGC CCGGATGCAG
GACGATGGTT TCGATGCCCT GATGCTTTCG GCAGACATCG CGGCGCGGCG CGGGCGCTAT
GCCCAGGCCC ATGCCACGCT GGAACGCGCG GCAAAGCGCT ATCCGCGCAT TCCGGACCCG
TGGATCGCCC GGGCCGATGC CTATGATCGA GAGGGCAAGC TCGACGAGGC GGTGGCAATG
ACGGCGCGGG CGGCGGCCCT TGCGCCGGAC GATCCGCGCG TGACCAATCT CAAGGTCGAG
TTCGCCGCGA TGAAGGGCGA CTGGGAGGCG GTCCGCACGG CGCTGGCGCG GCAGGAGGCA
ACGCTCGACC CGCTGTCGGC CAACGGGCTC ACCTATGCCG AGGCGATGCT GCGGCTGGGG
CGGCCGGAGC AGGCGCGGGC GATGTTCCAG CGCGCCCTCA CACGGTCGCC CAACAATCCG
TACTCGCGGC TCATGCTTGC GGAAGCGCAT CTGGCGACGG GCAATGCCGT TGCCGCGCTG
GAAACCGTGC GTCCGCTCGC GCAAAGCCTG ACGGCAGGTC CGCGCGAACT GGAACTTGCC
GAGAAGGCGG CACGGGCGGC CAACAGCGGC GAGGCCGACG CGCTGGCGGC TCGGCTCGCG
GCGGTCCGGA AGTCACAGGT CTCGGCGCTG GCTGCCAAGG GTCAGGCTGC GCTGGTCGGC
GAAGACTGGA ATGGCGCGAT CGAAGCCTAC GGACAACTTG CGCAGATGGG CGAGGATGCG
GACGTGCTGA AGCGGCTGGC GCTGGCGCTG AGCCACGCCG GACGGGTCGA CGAGGCCATC
AGGGCAGCGG ACCGTGCACG GACCCTTCGG CCCGGCGATC CGGACATGAG CTACATGGCC
GGGTATGTGC GCGTCGCGGG CGGGAAGGAC AAGGCCACCG GGCTTGGTCT GCTCCGCCAC
GCGACCGAGT CCGCGCCGGA CAATCTGGTC TTCAAGCGGG CGCTTGCGCG GTATTCGGCG
GCTGGCGGCG CCTGA
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| Protein sequence | MRNVRILSLA LLLSACGTDT ADRVARARSE IAGMELAAAR VDLAAALAER GDDAELLRLL
ASVQLRLGDG DGAEATAARL ERTGATGAEL ARMRAEAALL RGRAREALAL LGNDATTGGW
RVRAAALSAV GDGEGAFRAL QSGLAAGSDP LLLRDMARFL IDAQDLDGAQ RQVDALARMQ
DDGFDALMLS ADIAARRGRY AQAHATLERA AKRYPRIPDP WIARADAYDR EGKLDEAVAM
TARAAALAPD DPRVTNLKVE FAAMKGDWEA VRTALARQEA TLDPLSANGL TYAEAMLRLG
RPEQARAMFQ RALTRSPNNP YSRLMLAEAH LATGNAVAAL ETVRPLAQSL TAGPRELELA
EKAARAANSG EADALAARLA AVRKSQVSAL AAKGQAALVG EDWNGAIEAY GQLAQMGEDA
DVLKRLALAL SHAGRVDEAI RAADRARTLR PGDPDMSYMA GYVRVAGGKD KATGLGLLRH
ATESAPDNLV FKRALARYSA AGGA
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