Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_2111 |
Symbol | |
ID | 3917759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 2248829 |
End bp | 2251045 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640444864 |
Product | glycine--tRNA ligase |
Protein accession | YP_497384 |
Protein GI | 87200127 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.541212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG CAGACTTCCT TCTCGAACTG CGCAGCGAGG AAATCCCGGC CCGCATGCAG GCGGGCGCCC GCGCCGATCT GGAAAAGCTG TTCCGCAAGG AGCTTGACGC CGCCGGCCTG AAGGCGGGTG AGGTGACCGT GTGGTCCACG CCGCGCCGCC TCGCGCTGAT CGCGCGCGCT CTGCCGCTGG CGACGGAAGC CGTGTCCGAG GAAGTAAAGG GGCCACGCAC CTCCGCGCCC GAACAGGCAC TCGAAGGCTT CCTGCGCAAG ACCGGTCTGA CCAGGGACCA GTTGACCGAG CGCGATGGCG TATGGTTTGC CGTGACGGAG AAGCCGGGAC GCGCAACCAG GGATGTGCTC GCGGAAGCAG TCCCCGCGAT CATCCGCGCG TTCCCCTGGC CCAAGAGCCA GCGCTGGGGC GCGGCTTCGC TCTCGACCGA GTCCTTGCGC TGGGTGCGTC CGCTCTCGGG CATCGTAGCG ATCCTGGGCG ATGATCTGGT CGAGTGCGAG ATCGGGGCTG TGAAGTCCGG CTATGCCACG CGCGGCCACC GCTTCCATTG CCCGGGCGAA ATCACCATCG GCAGCGCGCA CGACTATGCC GACAAGCTCC GCGCCTGCCA CGTGATCGTC GATCACGTCG AGCGCGAGGC GATGGTGCGC GACAAGGCCA AGGCTGCGGC AGAGGCCGCT GGCCTCGTGC TGGTCGAGGA CGAAGGTCTG GTGATCGAGA ACGCGGGCCT CACCGAATGG CCGGTCCCGC TGCTCGGCCG CTTCGACGAG GCGTTCCTCG ACGTGCCGCC CGAAGTCATC CAGCTCACCG CCCGCGTCAA CCAGAAGTAC TTCATCTGCC GTGACAGCGC CGGAAAGCTC GCCAACGCCT TCGTCTGCAC CGCGAACATC GAGGCCAAGG ACGGCGGCGC CGCCATCGTC GACGGCAACC GCAAGGTGCT GGCGGCACGC CTCTCCGACG CCCGCTTCTT CTGGGAGCAG GACAAGAAGA AGCCGCTCGC CGAACAGGCG CAGAAGCTCT CTCGCATCAC CTTCCACGAA AAGCTCGGCA CCGTCGCGGA CAAGGTTCAG CGCGTCGTCA AGCTGGCCGA GTGGCTGGCA AGCGAAGGCA TCGTGCCGAA CTGCGATCCC GCTCTGGCGC GGCAGGCTGC GGAACTGTGC AAGGCCGATC TCGTCACCGA AATGGTCGGC GAATTCCCCG AACTCCAGGG CCTGATGGGC GGCTACTACG CCCGCGCCGA AGGTCTGCCC GATGCCGTGG CAGATGCCAT CCGCGATCAC TACAAGCCGG TCGGGCAGGG CGATGACGTG CCGACCGCGC CGGTAACGGT GGCAGTGGCG CTGGCGGATA AACTGGATAC GTTGGTCGGG TTCTTCCTAA TTGATCAGCG CCCCACAGGA TCGCGAGACC CGTTTGCGCT TCGACGTGCA GCTCTTGGCG TGCTCGAACT TCTCAACTGG GGTTCACTGC GCGTCTCGAT GTGGGAGGCA ATTGCGAAGG CACTCGCCGC ATTTACAAAG CAGCTTGTTT CTGACGACAT GGCGGAAGCT TCCTATGAAG CTTTTCAAAC AAACCAGAAG GCAGTGTTTA CGACACTTCC TGACTTCTTC GCCGACCGCC TCAAAGTCCA GCAACGCGAA GCAGGTGTCC GCCACGACCT GATCGATGCC GTGTTCGCGC TTGGAGGCGA GGACGATCTC GTCCGCCTGC TTGCCCGCGT CCATGCGCTT CAGGCCTTCG TCGGCACCGA GGACGGCACC AACCTGCTCG CAGGCTACAA GCGCGCCGCC AACATCCTCA AGAAGGAAGG CTTCGCCGCC AACCCCAACG CCGGGTCCGA AGGCGAGGGC GTGGTTCCGC CGACGGGCGA GGAAGATCCG CTGGTGCTGG TCGACGATCC GGCGATGGAA GGCGTCGTCG CGCAGTTCTC GCACCCCGAA TGCAACTACC AGCGCGAACC TGCCGAGCAG GCGCTCGTCG ATGCGCTGGA CTACGCAGAA CCAGCGGCAC GTGGTGCGGT CGAAAGTGAA GATTTCGATT TCGCCATGCG GGTGCTCGCC TCGCTTCGCG CGCCCATCGA CTCCTTCTTC GATCAGGTCA CGGTCAATGA TGCGGATGCT AACAAGCGTT CCAGTCGCCT TGCCCTGCTC GACCGGTTCC GTGCTGCGGT GCACAAAGTT GCGGACTTTT CGCGCATAGA AGGCTAA
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Protein sequence | MTTADFLLEL RSEEIPARMQ AGARADLEKL FRKELDAAGL KAGEVTVWST PRRLALIARA LPLATEAVSE EVKGPRTSAP EQALEGFLRK TGLTRDQLTE RDGVWFAVTE KPGRATRDVL AEAVPAIIRA FPWPKSQRWG AASLSTESLR WVRPLSGIVA ILGDDLVECE IGAVKSGYAT RGHRFHCPGE ITIGSAHDYA DKLRACHVIV DHVEREAMVR DKAKAAAEAA GLVLVEDEGL VIENAGLTEW PVPLLGRFDE AFLDVPPEVI QLTARVNQKY FICRDSAGKL ANAFVCTANI EAKDGGAAIV DGNRKVLAAR LSDARFFWEQ DKKKPLAEQA QKLSRITFHE KLGTVADKVQ RVVKLAEWLA SEGIVPNCDP ALARQAAELC KADLVTEMVG EFPELQGLMG GYYARAEGLP DAVADAIRDH YKPVGQGDDV PTAPVTVAVA LADKLDTLVG FFLIDQRPTG SRDPFALRRA ALGVLELLNW GSLRVSMWEA IAKALAAFTK QLVSDDMAEA SYEAFQTNQK AVFTTLPDFF ADRLKVQQRE AGVRHDLIDA VFALGGEDDL VRLLARVHAL QAFVGTEDGT NLLAGYKRAA NILKKEGFAA NPNAGSEGEG VVPPTGEEDP LVLVDDPAME GVVAQFSHPE CNYQREPAEQ ALVDALDYAE PAARGAVESE DFDFAMRVLA SLRAPIDSFF DQVTVNDADA NKRSSRLALL DRFRAAVHKV ADFSRIEG
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