| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1989 |
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| Symbol | |
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| ID | 3917309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 2117429 |
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| End bp | 2119192 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640444741 |
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| Product | hemolysin activation/secretion protein-like |
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| Protein accession | YP_497263 |
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| Protein GI | 87200006 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0548358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCGA AGTGCGTGGG GAAGACCCTG CTGCGAGGGG CGGCGGGGAT CGCTGGCGTT
GTTCTCGCGG CGATCCCGCT TGCGGCGAGT GCGCAAAATC TTCCTGGGCA GCCGGGCACG
GGCATTCCGT CACGCGATGA GCTCAAGGGC CTGACGGGGC AGGCTGCTGC GGCGCCGTCG
CGCCTTTCGA TAAAGGGCGG CATCGAGCGC TCCCCCTGTC CGCTCGACGA TCCGCAGTAC
GCAGACATTC GCGTCACGCT GAACAACGTC ACCTTCGCCG GTCTCAAGGA GATCGATCCG
GCCGAGCTTG CCGAGACCTG GAAGCCGCTG GTGGGGACGT CGCAGCCGAT TGCGGTGCTG
TGCGAGATCC GCGATGCGGC AGGCACGATG CTGCGCAACA AGGGATACCT TGCCGCAGTG
CAGGTCCCGA CGCAGAAGAT CGACAACGGC GAAGTGCGGA TGGAGGTCAT CTATGCGCGC
ATCACTACCG TACGGGCACG TGGCGAGACC CGGGGCGCGG AGCGAAAGCT CGAGCAGTAT
CTCTCGGCGC TGACCGGGGA CGAGGTGTTC AACCAGCGGC GGGCGGAACG ATACCTCCTG
CTGGCGCGTG ACCTGCCGGG CTACAACGTC CAGCTCACGC TCAAGCCTGC AGGGACCGGC
GCCGGCGATC TGGTCGGCGA GATCAGCGTC CTGCGCGAGC CTTATGCCGT CGACCTTACC
TTGCAGAACC TGTCTTCAGA AGCGACCGGC CGGTTCGGCG GGCAGATTCG CGCGCAGTTC
TTTGGCCTCA CGGGCATGGG CGATGCGACG ACCCTGTCCT ATTACGCCAC TTCGGATTTC
AGCGAACAGC ACATCCTGCA GGGGGCGCAC GAGTTTCGTC CGGGCAAGGA AGGGCTGATC
GTTGGGGGCC AGCTTACCTA CGCCTGGACC AAGCCTGACG TGCCGGGGCT TCCTGCCAAT
GTCAGCATCG ACGCGCGCAC CCTCTATGCC AGCCTCTATG CCCGTTTCCC GCTGCAGCGC
TCGCTTGCGC GAAACGTCTG GCTAAGCGGC GGGCTGGACC TGGTGAACCA GGACGTGGAC
CTCATCGGAC CGCTCACTCG CGACAAGGTG CGCGTGGGGT GGGCGCGGCT TGACGTCGAT
GCCGTGGATA CCGGACATGC CGCGCCGCAA TGGCGCATCG GGTCTTCGTT CGAAGTGCGG
CAGGGGCTGG ACATCCTCGA TGCGACGCGC GGTTGCATTG GCGCCGCCTG CGCAACACAG
ACGCCGACCA GCAGGTTCGA CGGATCACCG GCCGCGACGG TGCTGCGCTG GCAGGGCGAG
TACGAACGTG CCTTCGGCAG GTTCTCGGTG CTTGTGGCGC CGCGTGCGCA ATATGCGTTC
AAGCCACTGC TCAGCTTCGA GGAATTTTCG GCCGGCAACT ATACCGTCGG CAGGGGTTAT
GATCCGGGCG ACCTGATCGG TGACAGTGCC GTTGGGACGA GCGTGGAAGT GCGCGGCCCC
CGGCTTCCGA TAGGCGAGAG CCGCGACATC CGCATCCAGC CTTTCGTGTT CGGCGATTCC
GCATGGGTCT GGAACAAGGA CGTGCCGGGA TCGGAACGGC TGACGTCATT GGGCGGAGGC
CTGCGCGGCG ATATCGGCGC CCGCTTCAGG ATCGAGGCGA CGCTGGCCGT CCCGCTGGAG
AAGGTGGCGC TTCAGGTCCG CCGTTCCGAC CCGCGATTCC TGGTGACCCT TACCACGCGG
CTGCTGCCGT GGAGGACCTT CTGA
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| Protein sequence | MSAKCVGKTL LRGAAGIAGV VLAAIPLAAS AQNLPGQPGT GIPSRDELKG LTGQAAAAPS
RLSIKGGIER SPCPLDDPQY ADIRVTLNNV TFAGLKEIDP AELAETWKPL VGTSQPIAVL
CEIRDAAGTM LRNKGYLAAV QVPTQKIDNG EVRMEVIYAR ITTVRARGET RGAERKLEQY
LSALTGDEVF NQRRAERYLL LARDLPGYNV QLTLKPAGTG AGDLVGEISV LREPYAVDLT
LQNLSSEATG RFGGQIRAQF FGLTGMGDAT TLSYYATSDF SEQHILQGAH EFRPGKEGLI
VGGQLTYAWT KPDVPGLPAN VSIDARTLYA SLYARFPLQR SLARNVWLSG GLDLVNQDVD
LIGPLTRDKV RVGWARLDVD AVDTGHAAPQ WRIGSSFEVR QGLDILDATR GCIGAACATQ
TPTSRFDGSP AATVLRWQGE YERAFGRFSV LVAPRAQYAF KPLLSFEEFS AGNYTVGRGY
DPGDLIGDSA VGTSVEVRGP RLPIGESRDI RIQPFVFGDS AWVWNKDVPG SERLTSLGGG
LRGDIGARFR IEATLAVPLE KVALQVRRSD PRFLVTLTTR LLPWRTF
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