Gene Saro_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1811 
Symbol 
ID3918370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1910740 
End bp1911462 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID640444552 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_497085 
Protein GI87199828 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.300255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGCTAT CGGGAAAGAC CGTGCTGGTG ACCGGCGCGA CGGACGGGAT CGGCGCGCAG 
ATCGCACGCC AGTTACGTAA CAAGGGCGCG ACGGTCATTG GGCAGGGCCG CACCCCGGCG
CGGGTGGCGG CGGCGAGGGC CGATGGCTTT GAAATCGTCG AGGCGGACCT ATCCCTGCCG
CAAGGCGTGG AAACGCTGAT CTCGGCCATG GCAGGTCGCC AGATCGATGT GCTGGTCAAT
AATGCCGGGG CTGGAGTGGA TCACGATTTC CGCGACGGTC AGCCCGATGC GGCGGCGGCG
GATCGCACGA TCTTCCTCAA TCTCAATGCC CCCATTCACC TTATCACCGC GCTCATGCCT
GGGCTGAAGG CACGGCCCGA GGCAATGATC GTCAACGTGA CGTCCGGCCT CGCCATCGCG
CCGCGTGCGG GTGGCCCGGT CTATTGCGCC ACCAAGGCCG CGCTGCGCAG CTACACGCAG
GCTCTGCGCG CACAGTTGGC GGGAACCGGA GTGCATGTCG TCGAAGCCCT GCCGCCCGTC
GTCGACACCC AACTCACCGC GGGGCGCGGC AATCGCAAGA TGCCTGCCGC CGAATGCGCA
CGCCAGATCG TCGACGGGAT GGAGCGCAAC GTAACCGAAA TCAACATCGG GCTGGTCAAG
GTTCTACAGG TCGTGAACTC GGTTTCCCCC GCCCTGGCAC GGCGCATCAT GCTGAAGTTC
TAG
 
Protein sequence
MELSGKTVLV TGATDGIGAQ IARQLRNKGA TVIGQGRTPA RVAAARADGF EIVEADLSLP 
QGVETLISAM AGRQIDVLVN NAGAGVDHDF RDGQPDAAAA DRTIFLNLNA PIHLITALMP
GLKARPEAMI VNVTSGLAIA PRAGGPVYCA TKAALRSYTQ ALRAQLAGTG VHVVEALPPV
VDTQLTAGRG NRKMPAAECA RQIVDGMERN VTEINIGLVK VLQVVNSVSP ALARRIMLKF