Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1710 |
Symbol | |
ID | 3916285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1797170 |
End bp | 1797823 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444451 |
Product | TetR family transcriptional regulator |
Protein accession | YP_496984 |
Protein GI | 87199727 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.160964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTCG TCATGGCGAC GCTGACCGAA ACCCTGACCA CGCCCGACCG GCTTCTGGCG GGCGCCGAGA GGCTGGTGGT GCGAGAAGGC GTGCGCGCGC TGACGGTGCG GCGGATCGCG GAGGAGGCCG GGGTCAATTC GGCGCTGGTG CGCTATCATT TCGGCGATAC CGGCGGGTTG CTGGGCGAAC TTGCGCTTCG CAACGCCGCG CAGATGGCGA ACGAGCGAAC GGCGCTTCTG GACAGGCTCG TGCCCGGAGA TTTCATGGGC GCGGTCGATG CGCTGGTGGT GCCGCTGTGG GCGCGCGCGG CGATGAGCAG GCAGTTTCGT GCGATCGTGG TGCTGGACGA AATGTTTGCA CGGTCCGGCA GCGATCTCAA CGCCAGGATA TGGAGCGTCT TTGCCGACGG GGTGACGCGG GTGCAGGCGG CATTGGAAGC CTGCCTGCCG GGCGTGGACC CGCTTGCGCT GGCATGGCGC ATACGATTCG TGACGGCAGC GGCGCTCGAC ATCCCGCCGC GCGGATTGCC AGACGGTCGC GTGGGAGCCC GGGCGGCCTA TGGTGCCGAC AGCGAGGAGG AAAGGCTGGC CCATTTCCGC CTCTTTGCCG CGGACTCGCT GCGGATGGAC AAACGGGACG GTTACAGTTC ATAG
|
Protein sequence | MTFVMATLTE TLTTPDRLLA GAERLVVREG VRALTVRRIA EEAGVNSALV RYHFGDTGGL LGELALRNAA QMANERTALL DRLVPGDFMG AVDALVVPLW ARAAMSRQFR AIVVLDEMFA RSGSDLNARI WSVFADGVTR VQAALEACLP GVDPLALAWR IRFVTAAALD IPPRGLPDGR VGARAAYGAD SEEERLAHFR LFAADSLRMD KRDGYSS
|
| |