Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1696 |
Symbol | fumC |
ID | 3916271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1782016 |
End bp | 1783392 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640444437 |
Product | fumarate hydratase |
Protein accession | YP_496970 |
Protein GI | 87199713 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.397787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCGGA TCGAAACCGA CAGCCTGGGC GAAGTGCGCG TGCCCGCAGA TGCCTATTGG GGCGCCCAGA CGCAGCGAAG CATCGAGAAC TTTCCGTTCG GCGAGATGGA GCGGATGCCG ATTGGCATCA TTCGCGCACT GGCGCTGGTA AAACGGGCAG CGGCGGGGGT GAACCGGGCA CACGGGCTAG ACCCGACGCT GGCCGACGCC ATCGAACGGG CCGCCGCCGA AGTGGTCGAC GGCAAGCTGG ACGACCAGTT CCCGCTGGTC ATCTGGCAGA CCGGCAGCGG CACCCAGTCC AACATGAACG CCAACGAAGT CATCGCAGGG CGCGCCAACG AGATCCTTAC CGGCAAGCGC GGAGGCAAGA GCCCGGTCCA TCCCAATGAC CACGTAAACA TGGGCCAGTC CTCGAACGAC ACCTTCCCTA CCGCGCTGCA CGTCGCGGCC GTCGAGGCGC TGAACCGAGA CCTGCTGCCC GCGCTGGGAC GGCTGCGGGG CGCGCTGGCG GGCGCGGCGC TCGCGTGGAA GGATATCGTC AAGATCGGGC GAACCCACTT GCAGGATGCG ACCCCGCTGA CACTGGGGCA GGAGTTTTCC GGCTATGCCG AGCAGTTGCG CGGCATCGAA GCGCACCTGA AGGCCGCCGA GACGCACCTT CTGCGACTGG CGCAAGGCGG GACTGCGGTG GGGACCGGGC TCAATGCGCC GGAAGGCTTT GGCGACGCCA TGGCGGCAGA AATCGCCGCA TTGACCGGCA GGCCCTTCGT TTCCGCGCCG AACAAGTTCG AAGCGCTCGC CAGCAACGAC GCTCTTGTCC AGTTTTCGGG GACGCTTTCG ACGCTGGCGG TGGCGCTGAC CAAGATTGCC AACGACATCC GCCTGCTGGG TTCCGGCCCG CGCTCAGGCC TTGGCGAGCT GGAATTGCCG GCCAACGAAC CGGGCAGTTC GATCATGCCC GGCAAGGTCA ACCCGACGCA GGCCGAAATG CTCACGATGG TGGCGGCGCA GGTGATCGGC AATCATCAGG CCGTGACCGT GGGAGGGATG CAGGGGCATC TGGAACTCAA CGTGTTCAAG CCGATGATCG GCGCCGCCGT GCTGCGATCG GTCCACCTGC TGTCGACCGG CATGACAAGC TTTGCCACCC GCTGCGTCGA AGGGATCGAG CCGAACCGGC GGCGGATCGC GGACCTTGTC GAACGCTCGC TCATGCTTGT GACCGCGCTG GCGCCGGAGA TCGGGTACGA CAACGCGGCG AAGATCGCCA AGCACGCGCA CGAGCATGAC CTGAGCCTGC GACAGGCGGC GCTGGCGCTG GGACTGGTTG ACGAGGCGAC GTTCGACCGG CTTATCCGAC CGGGGGACAT GGTCTAG
|
Protein sequence | MHRIETDSLG EVRVPADAYW GAQTQRSIEN FPFGEMERMP IGIIRALALV KRAAAGVNRA HGLDPTLADA IERAAAEVVD GKLDDQFPLV IWQTGSGTQS NMNANEVIAG RANEILTGKR GGKSPVHPND HVNMGQSSND TFPTALHVAA VEALNRDLLP ALGRLRGALA GAALAWKDIV KIGRTHLQDA TPLTLGQEFS GYAEQLRGIE AHLKAAETHL LRLAQGGTAV GTGLNAPEGF GDAMAAEIAA LTGRPFVSAP NKFEALASND ALVQFSGTLS TLAVALTKIA NDIRLLGSGP RSGLGELELP ANEPGSSIMP GKVNPTQAEM LTMVAAQVIG NHQAVTVGGM QGHLELNVFK PMIGAAVLRS VHLLSTGMTS FATRCVEGIE PNRRRIADLV ERSLMLVTAL APEIGYDNAA KIAKHAHEHD LSLRQAALAL GLVDEATFDR LIRPGDMV
|
| |