| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1626 |
|---|
| Symbol | |
|---|
| ID | 3918734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1699641 |
|---|
| End bp | 1701191 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640444366 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_496900 |
|---|
| Protein GI | 87199643 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0797094 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAC GCGAAAGCGA TGTCTGCGTC ATCGTCGAAG GCGCCTATCC CTATGTTACG
GGCGGCGTTG CAAGCTGGCT TCAGGAATTG ATCACCAGCT TGCCGGAACT GACCTTTTCC
GTCGTGGCGA TCAAGGCCGA CGAGGAACCA CAGAAATGGA ACGTCGAACC GCCCCCAAAC
GTGATCGAGG TCGTGGAGGT CCCGCTGTCG TTCGCCCCGC GCAGACCGGC CGCGCTACCG
CCGAGCCTTG CCGACCGGAT AGGGCGCCTG CTCCTGCGTT TCCTTCAGGA GGGCCAGCCC
GAAATACTGC GAACCCTGGT GGCCGAGCTG GCCGCGCTCG ATCGCAAGCC GCATCCTGGC
GATGTCATGT CCAGCGCGCA GATGTTCTCG ATCCTCACGG AACATTACCG CGAAGCATTC
CCCTCCGCTT CGTTCCATCA TTTCTTCTGG GCAACCCGGA TCCTCTTGGG AGGCTTGCTC
GCCGTTCTTC TGGCGCCGCT GCCGAGGGCA CGCACCTACC ACACCCTGTC CACCGGGTTC
GCTGGCCTGC TTGCGGCGCG CGCGCGGCAT GAAACCGGAC GCCCCGCGTT CCTTACCGAG
CACGGCATCT ATCTGCTCGA GCGGCAGATC GAGATCATGA TGGCGGAATG GATGGGGGAT
CAGATCGACA ACGGACTGGC GCTTGAACGC GAACAGCATG ATCTGCGCGA CCTGTGGGCG
GCTGCGTTCG AAAGCTACGC CCGAGGGTGT TACGACGTCT GCCATCCGAT CATTGCGCTT
TACGGCGCCA ACAGCGAAGT CCAGGCGCGC ATGGGGGCTC GGCGCAAGAG CCTGCGGGTC
ATCCCCAACG GCATCCGGCC TGAACGCTTC GAGGGCGTAG TCTCCCGCCG TGACGAACAG
CGGCCGCTCA TTGCTCTCAT CGGCCGCGTC GTACCTATCA AGGACATCAA GACCTTCATT
CGTGCCGCAG GTCTTGTTCA CGCGGCATTC CCCGATGCGC GCTTTGCGGT GCTCGGCCCC
CGGGATGAAG ACGTGGATTA CGCTCTCGAC TGTACTGCGC TTGTCGACGA ACTCGGACTC
GGAGACGTGA TCGCGTTTCC CGGCCGGGTC AATGTGGTCG ACTGGATGCC GAAGATCGAC
ATACTCGTCC TGACCAGCCT ATCGGAAGCC CAGCCGCTGG TCATTCTCGA GGCAGGCGCA
TGCGGCATTC CATCGGTTGC GCCCGATGTT GGCAGTTGTC GCGAACTGAT CGAAGGCAAT
AAGCCGGGCG AACCCCATGG CGGTATCATC ACGGCTCTTG TCGATCCCGA GGCGACCGCC
GCAGCGCTTC TGCGTCTGCT GCGCCATCCT GATTTGCGCG CCTCGATGGG CGAGGTGATG
CGGGCGCGGG TCCATGCGGA TTACGACTGG TCGGGTATCG TGGAACAGTA TCGTCGTATC
TATTCGGGGA AGGAGGAGCC TCGCCAAATG GCGGTGGTCG GTTCGCCACC GGTCCCTCGT
GCGACCTTGC GCGATGTCGC GAACGCGATT CGCGGACCGT CGAAGGGGTG A
|
|---|
| Protein sequence | MTGRESDVCV IVEGAYPYVT GGVASWLQEL ITSLPELTFS VVAIKADEEP QKWNVEPPPN
VIEVVEVPLS FAPRRPAALP PSLADRIGRL LLRFLQEGQP EILRTLVAEL AALDRKPHPG
DVMSSAQMFS ILTEHYREAF PSASFHHFFW ATRILLGGLL AVLLAPLPRA RTYHTLSTGF
AGLLAARARH ETGRPAFLTE HGIYLLERQI EIMMAEWMGD QIDNGLALER EQHDLRDLWA
AAFESYARGC YDVCHPIIAL YGANSEVQAR MGARRKSLRV IPNGIRPERF EGVVSRRDEQ
RPLIALIGRV VPIKDIKTFI RAAGLVHAAF PDARFAVLGP RDEDVDYALD CTALVDELGL
GDVIAFPGRV NVVDWMPKID ILVLTSLSEA QPLVILEAGA CGIPSVAPDV GSCRELIEGN
KPGEPHGGII TALVDPEATA AALLRLLRHP DLRASMGEVM RARVHADYDW SGIVEQYRRI
YSGKEEPRQM AVVGSPPVPR ATLRDVANAI RGPSKG
|
|---|
| |