| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_1521 |
|---|
| Symbol | |
|---|
| ID | 3917196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 1565208 |
|---|
| End bp | 1566404 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640444262 |
|---|
| Product | Flp pilus assembly protein ATPase CpaE-like |
|---|
| Protein accession | YP_496796 |
|---|
| Protein GI | 87199539 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC CTGGCGCTTC GGCCACGACC TCGCCCTTTG GCGGAAATGG TCCAGTTGTC
GCAGTGTGTG CTTCGGCGAA GCAACTCGCC TTGCTCGAAC GGCAAGTAGA TGCTCTTGCT
CGAATCCTGG TTGTTCCTTT CCCGCTCGGC TCCGCGGACG GGGTTGATCA GACTTCTGTC
GCAAAGGCGT CGGTTTTTGT CCTCGAGGTC GATCCGGCCG ATAGGGCTTC GGTCGATCGC
CTGATCCGGA TGCGCAAGGC GATGCCCGCA ACTGCGCTCA TTGCCGCCGT CGAAAACCCT
GATCTTACCC TGACGCGCAC TCTCGTGCGC GAAGGGGTCA CTGACGTGAT TGCCTTGCCG
TTTCGAGCCG ATGAACTTGT CAGCGCAACG CTCGATGCCA TGGCGCGGCA TGCGCAGGCG
ATCGTTCCGG TGACGCTCGC GCCCGTGATT GGCGTGGTAC GCAGTTGCGG AGGATGCGGG
GCTACGACGG TCGCCACGCA CCTTGCCCAT GCCCTCAATC AATTTAGCTG GACGAATGGT
CCGGCTATCG TTGCGGACCT CGATCTCCAG TTCGGCGAAG TCGGCGCATA TCTTGACAGC
AGTCGCAGTG GGTCGATCAC CGATCTCATG CTCGCGCATG ACAGGATTGA CCGCGAGTTC
CTCTATTCCA TGGCGCCGCC TACCTCTGGC GGTGTCGGGG TGCTGTCTGC GCCAGCTACC
ATCAACTCAA TCGAGTCCGT GAACGTCGAT GACATGCTCT TCGTCCTGGA CCAGCTGCGC
CGGAATTACG GAGTAGTTGT CCTCGACTTT CCATCCGCAT GGAGCAACTG GGCTGCATCG
TTGGCCGTTC TTTCCGACAT TCTATTGCTG GTGACGCCCG TTGCACTTTC CGGACTGCGG
CAGACGAAAC GAACACTCGA CCTGTTTCGG ACATTGGAAA TTCCGGACGA AAAGGTGGCA
ATCGTGGCCA ATCGCGTCGA GCGGAAACTT TTCCGCCTTG TTGGTACGAG CGAGGCTGAG
GCGGCGATCG GCCGCAGTTT CGCCGCCTCG CTCTCGGATG AAGGCGATCA GATGGTTCGT
GCGCAGGAGC AGGGCGTACT GATCCACAGC ATCCAGAAGA AGACCTCTTT CAGCACAGCG
CTGATGAAGC TTGCGCAGTC GATACACGTT CAGTTGCATT CCGGACAGTT GCTATGA
|
|---|
| Protein sequence | MSGPGASATT SPFGGNGPVV AVCASAKQLA LLERQVDALA RILVVPFPLG SADGVDQTSV
AKASVFVLEV DPADRASVDR LIRMRKAMPA TALIAAVENP DLTLTRTLVR EGVTDVIALP
FRADELVSAT LDAMARHAQA IVPVTLAPVI GVVRSCGGCG ATTVATHLAH ALNQFSWTNG
PAIVADLDLQ FGEVGAYLDS SRSGSITDLM LAHDRIDREF LYSMAPPTSG GVGVLSAPAT
INSIESVNVD DMLFVLDQLR RNYGVVVLDF PSAWSNWAAS LAVLSDILLL VTPVALSGLR
QTKRTLDLFR TLEIPDEKVA IVANRVERKL FRLVGTSEAE AAIGRSFAAS LSDEGDQMVR
AQEQGVLIHS IQKKTSFSTA LMKLAQSIHV QLHSGQLL
|
|---|
| |