Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1384 |
Symbol | |
ID | 3917838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1429739 |
End bp | 1430173 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640444126 |
Product | general secretion pathway protein I |
Protein accession | YP_496662 |
Protein GI | 87199405 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.35215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGCTG ACAACAGGCC CCCGATCCGC GCTCCGATCC GCGCCCCGAT CCGGGCCCCG ATCCGCGCCC ACGCCAACGG CTTCACCCTG CTCGAGCTTC TGGTCGCGCT CGCGGTCTTT GCCATCGCAG CCCTGGCGCT GCTCCAGATG GAGGGCGCCA GCATTGCGCG AACCGCGGAC CTCGACCAGC GCCTGCTGCG CGAGATCGTC GCACAGAACA TGGCGGCCGA GATCCTGAGC GATCCCGCCC CGCCGCCGGT CGGCTCGGCC AGCGGGACCA TCGAGAATGC CGGCCGCCGC TTCCAGTGGA CGCGCACCGT TGCGCGACGG GCTGACTTCG GCGTTCTGGG GATCACCCTT TCCGTCCGCG AGACGACGCC GGGTGCGCAG AGCCAGGCCT TTTCGCTCGA TTTCACCCGG CTCCCCGCGG CATGA
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Protein sequence | MPADNRPPIR APIRAPIRAP IRAHANGFTL LELLVALAVF AIAALALLQM EGASIARTAD LDQRLLREIV AQNMAAEILS DPAPPPVGSA SGTIENAGRR FQWTRTVARR ADFGVLGITL SVRETTPGAQ SQAFSLDFTR LPAA
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