Gene Saro_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1228 
Symbol 
ID3917859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1280878 
End bp1281339 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content64% 
IMG OID640443965 
Productthioesterase superfamily protein 
Protein accessionYP_496507 
Protein GI87199250 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0931221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA ACAGTGAAGC TCCGATCAGG GGCAATTTCG AGCGCGTGAC GCGGGGGCCC 
TTCGAAGGTT GGTGGAAGTG GTCGGGCAAG GACCCCTTCG AGGACGGCAC CGGCCCGTTC
TTCGTGACCA GGGACGAGCG CGGGATCGTC ACCGGTTTCA TGCCGGAGCA GAAGAACCTC
AATGGTCACG GCATCGTCCA CGGTGGCGCC CTGATGACTT TCGCCGACTT CTCGCTGTTC
ATGGTGGCAG CTTCGAACGG CGACGAGGTG ACGGGGGTGA CCGTAACGCT CAACTGCGAA
TTCGTGAGCG GAGCACAAGC CGGCGAGATG CTGACCTCGC GCGGGGAACT AGTGCGAGCC
GGCGGTAGCC TCGTCTTCGC AAGAGGCACG ATCTTCTGCG GCGAGACGCC CGTCCTGTCC
TATTCGGGCA CGATCAAGCG GGCGCGGCGC GTCTCGCACT GA
 
Protein sequence
MSENSEAPIR GNFERVTRGP FEGWWKWSGK DPFEDGTGPF FVTRDERGIV TGFMPEQKNL 
NGHGIVHGGA LMTFADFSLF MVAASNGDEV TGVTVTLNCE FVSGAQAGEM LTSRGELVRA
GGSLVFARGT IFCGETPVLS YSGTIKRARR VSH