Gene Saro_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1175 
Symbol 
ID3916472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand- 
Start bp1215126 
End bp1215764 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID640443911 
Producthypothetical protein 
Protein accessionYP_496454 
Protein GI87199197 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.649225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA TGCCGAGCGC CGACCTTTCC TACCTGATCG GACTGCTCGA CCTTGCGGGC 
ATTGCCGTCT TCGCGCTGAC CGGGGCGCTG CTGGCGGCGC AACTGCGGCA GACCTTCGTG 
ACCATGGCAT TCTTCGCGCT GGTGACGGGC GTGGGCGGCG GATCGGTGCG CGATCTGCTG 
ATCGGGGCGC CAGTGTTCTG GGTTCGCGAT CCGTGGGTGG CGCCGGTGTG CCTTGGCGTG 
GCGCTGGTCG CATGGTTCAC GCCGCACCGC TGGTGGGAGC GGCCCGTGCT GGAATGGGCG 
GACGCGGCGG GGCTTGGCGC CTATGCAGTG CTGGGCACGG TGAAAGCCCT GGCGTTCGGC 
GTGCCACCTG TTCCGGCGGT ACTGATGGGA GTGATCACCG GGTGCGTCGG CGGGATCATC 
CGCGACGTGC TTGCGGGCCG CCCGTCGATC CTGATGCGGC CGGAACTCTA CGTGACGGCG 
GCAGCGCTTT CGTCGGGGCT CTGCGCGGCG GGCGCGGCGC TGGGGCTCGC GAAAGGGCTG 
GTTTGGCCGG TCGCGGCGAT GGCGGGGTTT GCGCTGCGCG GCGCGGCGAT CTGGTGGCGA 
CTGGGCTTGC CGACATATTC GGCGGAGCGC GAGGGCTGA
 
Protein sequence
MPEMPSADLS YLIGLLDLAG IAVFALTGAL LAAQLRQTFV TMAFFALVTG VGGGSVRDLL 
IGAPVFWVRD PWVAPVCLGV ALVAWFTPHR WWERPVLEWA DAAGLGAYAV LGTVKALAFG 
VPPVPAVLMG VITGCVGGII RDVLAGRPSI LMRPELYVTA AALSSGLCAA GAALGLAKGL 
VWPVAAMAGF ALRGAAIWWR LGLPTYSAER EG