Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1014 |
Symbol | |
ID | 3915796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1054424 |
End bp | 1055125 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640443748 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_496293 |
Protein GI | 87199036 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.362797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTCC AGATGCTTGC CAACGGCGTT TCCTTCGCGC CGACCTCGCT CAATCCGGTG CAACTGTTCC TCGATGCCGA CTATGTCGTG CAGGCGGTCA TGGCGGGCCT CGTGCTCGCG AGCATCTGGA CGTGGACGAT CATCATCGGC TTCTCGCTTA AGATGGGCAG CGTCCAGCGC GGCTGCGACG CGTATGAGCG CGAATTCTGG GAAGCGCGCG ACATCGACCA GTTCCACAAG GACAACAAGG GCAAGGACCT GCCATCGGTG CGCGTGGTCG CGGCCGCGCT GACCGAATGG CGCCGGTCCA CCTCGGGCAG CGCTATCGAT CGCGATGGCA CCCGGCAGCG GCTGACGACC GCGCTCGATG GGGCGGTGGT GGCCGAGACC GATGCACTCG CCAGCCGCCT GAACTTCCTC GCCACGGTCG GGTCGGTGGC GCCCTTCGTC GGGCTGTTCG GCACGGTCTG GGGCATCATG GACAGCTTTT TCAACATCGG CGCGCAGCAG AACTCCTCGC TCGCCGTCGT CGCTCCCGGC ATTTCCGAGG CGCTGTTCGC CACGGCCATC GGCCTTTTCG CGGCGATCCC GGCGGTCATC GCGTACAATC GCTTCTCGCA CCGCGTGAAC CGCTTCGAGA CGCGCCTCTA CCGCTTCGCC GACCGGTTCC ACGCCTCGCT CAGCCGCGAA CTGGAGGTCT GA
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Protein sequence | MTLQMLANGV SFAPTSLNPV QLFLDADYVV QAVMAGLVLA SIWTWTIIIG FSLKMGSVQR GCDAYEREFW EARDIDQFHK DNKGKDLPSV RVVAAALTEW RRSTSGSAID RDGTRQRLTT ALDGAVVAET DALASRLNFL ATVGSVAPFV GLFGTVWGIM DSFFNIGAQQ NSSLAVVAPG ISEALFATAI GLFAAIPAVI AYNRFSHRVN RFETRLYRFA DRFHASLSRE LEV
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