Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0681 |
Symbol | |
ID | 3918106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 717676 |
End bp | 719388 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640443412 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_495962 |
Protein GI | 87198705 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.577585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG AGCTGGACCT TGCAATGGAC CGCGCATTTG CCGCGCTGAC GGCCGAAGGC GGCATGTTCC AAACGGTTCC GATCCGGCGT TTCGGCCGCG ACTTGCCGAT GATTGCCGCT GCGCCTCCGC ATCTTCCGGC CTATTTTGCC TATTTCTCAG CCACTCACGG CGACAAGACC TTTATTGTCG ACGGCGACCT GCGGCTGTCC TTTGCCGACG TCTACAAGGC CGCGCGCCAC GTTGCGGGCG GACTGGTCGA AGGCATCGAG CTGCAGAAAG GCGAGCGTGT CGGTATCGCG GCGCGCAATT CCGCCAACTG GATCATCGCC TACATGGCCG TGCTCATGGC CGGCGGCTGT GCGACCCTGC TCAATGGCTG GTGGCAGGGT GAGGAACTTG CACACGGCAT CGAGCTGGTC AGTTGCCGCT ACGTGATTGC CGACAGCGCG CGCGCGGCCC GGCTCGAAGG TCATGCCCAT GGTGCCACCG TGCTCCCGAT GTCGCACGAC TGCGGCTATG AGCAGGGCCT TGCCGCGCTG CTCGCCAGGG GCGGAGGCAT GGAAACGCTC TTGCCGGACC TGACCGGGGA CGATCTGGCG ACGGTCCTGT TCACCTCGGG TTCGACTGGC ACGGCCAAGG GGGCCTATTC CGACCATCGT GGCGTCGTAC AGGGGACGAT GAACTACGTC TGCCAGTCGG CCGCTATGCT CGCCATCCTC ACCGCCCGGG GCGAGGCGCC GGCTCCCGAT GCGCAGCCGA CCACGCTGGT CAACGTGCCC CTGTTCCACG TGACCGGCGA AGTCCCGGTA TTCCTTCAGT CGTTCGCGCT CGGTCGCAAG CTGGTGCTCA TGGCCAAGTG GGATGCGGTC GACGCTATGC GATTGATCGA AAAGGAAAAA GTCTCCTATT TCGTCGGCGT ACCGCTGATG AGCTTCGAGA TCGCCACCCA CCCCGATCGC GACAAATACG ACCTGTCGAC CTGCGTTTCC TTCGCAGCCG GCGGGGCGCC GCGCCCCGTC GAACACGTCG ACCGGTTGCG CAAGGCCTTG CCACACGCCT TCCCGCTCCT GGGCTACGGC CTGACCGAGA CCAACGGAGT GGGCTGCGGC AACCTGAACG AAAACTACCT CGCAAAGCCG GGTAGCACCG GCACCGCATC GCGGCCGCTG GTCGACCTCG CGATCCTCGA CGATGCCGGC AATCCGCTGC CGACCGGCGA AGTCGGGGAA GTCTCGATCC GTTCGATCGC CAATTTCCTG GGCTACTGGG ATAACGAGAA GGCCACGCGC GAGGCGATCA CCCCCGATGG TTACTTCCGC AGCGGGGACC TCGGTTATCT CGATCCCGAG GGCTACCTGT TCATCGTCGA CCGCAAGAAG GACATCATCA TCCGTGGCGG CGAGAATATC TCGTGCATCG AGGTGGAAAG CGCGATCTAC GCCCACCCTT GCATCGCGGA AGCCAGCGTG TTCGGCCTGC CCGACGAAAA GTTCGGCGAA GTGCCGGCGG CGGTCTATCT TGCCAAGGAA GGCTGTTCGG CCACCGATGA CGAGTTGCGC ACCTTCCTTG CCGAACATAT CGCCCCGTTC AAGATTCCGG TGCGTTTCTG GGAGGTCCAC GAGGCGCTGC CCCGCCTTGG CACCGAGAAA GTCGACAAGC GCACTTTGCG CGAGCGCTAC ACGCGGGAAT GGCTCGCGAG CGCGACCGCC TGA
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Protein sequence | MKTELDLAMD RAFAALTAEG GMFQTVPIRR FGRDLPMIAA APPHLPAYFA YFSATHGDKT FIVDGDLRLS FADVYKAARH VAGGLVEGIE LQKGERVGIA ARNSANWIIA YMAVLMAGGC ATLLNGWWQG EELAHGIELV SCRYVIADSA RAARLEGHAH GATVLPMSHD CGYEQGLAAL LARGGGMETL LPDLTGDDLA TVLFTSGSTG TAKGAYSDHR GVVQGTMNYV CQSAAMLAIL TARGEAPAPD AQPTTLVNVP LFHVTGEVPV FLQSFALGRK LVLMAKWDAV DAMRLIEKEK VSYFVGVPLM SFEIATHPDR DKYDLSTCVS FAAGGAPRPV EHVDRLRKAL PHAFPLLGYG LTETNGVGCG NLNENYLAKP GSTGTASRPL VDLAILDDAG NPLPTGEVGE VSIRSIANFL GYWDNEKATR EAITPDGYFR SGDLGYLDPE GYLFIVDRKK DIIIRGGENI SCIEVESAIY AHPCIAEASV FGLPDEKFGE VPAAVYLAKE GCSATDDELR TFLAEHIAPF KIPVRFWEVH EALPRLGTEK VDKRTLRERY TREWLASATA
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