Gene Saro_0574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0574 
Symbol 
ID3915586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp621723 
End bp623030 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID640443304 
Productsignal transduction histidine kinase 
Protein accessionYP_495855 
Protein GI87198598 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGG AAACCCAATC CCGCGTGCTC TGGTGGCAGC GCGCCCCGCG CATTCCCACG 
CTTGCGTTGT TCGCCGTGGT GGCCCTGGCC CTGCTCGGGA CGTTCTCGCT CATCATCGCC
ACGGTCGAGG CCGAGCGCAC CCAGCGCGAG CAGGCGGCGC GCACCAGCGG CATACTTGCC
TCGCTGGACG AAATCATCCG CGCGACGATG AACGGCGAGA CCGGGCAGCG CGGCTACTTC
ATCACCAGCG ACACCCGGTA TCTGGCACCC TACCGCGAAG GGCAGGAGCG CTATTCCATC
GAGATCCGGC GCCTGCGCGA GAAGATGGGC GGGGAACTGC CCGAGGAGCA GGCGCTGCTG
GTGGGCGAGA TCTCGCGGCT GGGCGATGCC AAGTGGGCGG AAATGGCGGG CGTCGTCCGG
CTGGTCGAGG AACGCCGCAT TCCCGACGCC CACGCACGGC TGCTTTCCGA CGAAGGCCAG
CTTGCCATGA ACGGGCTGCG CCGTGCCGTC GCCAAGCTCG AGGACATCGA GCGCATCAGG
CTGGAGCAGG CCGTGCAGCG CGCGGCGGCG GCCGAGGCCA AGATCCTGCC TTCGCTGGCC
GCGCTGTTCG TTGTCATCGT CTGCGCGCTG GCGCTGGGCC TGTGGCAGGC GATCCGCAAG
GCAGAGGCAG AGGCCCTGGC CGAGGGCGCG GCGGCGATCG CCGAGGCGCG CGACCGAGCG
GACCTTCTCG CCAAGGAACT CAACCACCGG GTGAAGAACC TCTTCGCGGT GATTCTGGCC
ATCGTGAAGA TGAGCGCGCG CGGCGATGCC GCAGCAGCGC CCGCGGTGGA CCGCATCGCC
AAGCGCATCC ACGCCCTGGT TACCGCGCAC GAAGTGACGC AGGGCACCGG CAAGGACCAG
ACGGTCGACT TCGCGGACCT CGTCGGCAAG GCCATCGCGC CCTATCGTTC GTCCTCGGAG
CGATGCGAAC TGGCCGGCGA GGAGCTTGTC CTGCCGGGCA AGCATGCCGT CCCACTGGGG
CTGGTGCTGC ACGAACTGGT GACCAACGCG GTCAAGTACG GTGCATGGTC GCAGCCCGGC
GGGCTTGTGC GGGTGCGGTG GAGCCGCGAG GGCTCGCGCG CGAAAGTGCT GTGGGAGGAA
CTGGCCGCAG GCGAAAGCGC GACAGCCGCG AAGCCGGGAC GCGAGGGCTT CGGATCGGCA
TTGATCCGCT CGTCCGAGCG CCAGCTTGGC GGAACCATCG CGCGCCGCTT CGATGTGCGC
GGGATCGTGG TGGAAATGGA CTTTGCGCTG GAGGGCGCCG AGGACTGA
 
Protein sequence
MKRETQSRVL WWQRAPRIPT LALFAVVALA LLGTFSLIIA TVEAERTQRE QAARTSGILA 
SLDEIIRATM NGETGQRGYF ITSDTRYLAP YREGQERYSI EIRRLREKMG GELPEEQALL
VGEISRLGDA KWAEMAGVVR LVEERRIPDA HARLLSDEGQ LAMNGLRRAV AKLEDIERIR
LEQAVQRAAA AEAKILPSLA ALFVVIVCAL ALGLWQAIRK AEAEALAEGA AAIAEARDRA
DLLAKELNHR VKNLFAVILA IVKMSARGDA AAAPAVDRIA KRIHALVTAH EVTQGTGKDQ
TVDFADLVGK AIAPYRSSSE RCELAGEELV LPGKHAVPLG LVLHELVTNA VKYGAWSQPG
GLVRVRWSRE GSRAKVLWEE LAAGESATAA KPGREGFGSA LIRSSERQLG GTIARRFDVR
GIVVEMDFAL EGAED