| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0397 |
|---|
| Symbol | |
|---|
| ID | 3918281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 434462 |
|---|
| End bp | 435793 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640443126 |
|---|
| Product | cation transporter |
|---|
| Protein accession | YP_495679 |
|---|
| Protein GI | 87198422 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCCCTTA GACTTACTCA TCCAGCGCGT CTTGTTCCGT TGGTCTTCTC CGCGGCAATT
GTCCTTGGCA CGGTCATTCT CATGCTGCCG ATCGCGCGCG CGGGGGCAGG TAGCGCCCCC
TTTCTGACGG CTCTCTTCAC GTCCACTTCA GCCATCTGCG TTACCGGTCT GATAGTACAG
GACACCCCAG TTTACTGGTC CTCATTTGGC CAATGGGTGA TCCTCCTGCT CTTCCAGGTC
GGCGGATTCG GGATCATGTC AGCCGCAACA TTGCTGGGGC TGCTGGTTGG CCGGGGCTTC
CGATTAAGTG ATCGGCTGCG CACGCGCGTA GAGCGCAGCC ACTTCGATTT ACACGATGCC
CGCAGCGTTC TGCGCCTGAT CCTGCTGGTT ACGATAGTCG TCGAGGGTAC GCTTGCCCTT
TTGCTCACTC TTCGGTTGCA CTTTGGTCAT GGCTACGACT GGGCGGATGC CGCATGGCAC
GGCATCTTTC ATGCTGTTTC AGCGTTCAAC AATGCCGGAT TTTCGACTTT CTCCGACAGC
CTGATGGGCT TCCAGAACGA CTGGCTCTTC CTCGTCCCGG TTATGCTTGC GATTGTCCTC
AGTTCACTCG GATTTCCGGT CCTGCACGAA ATCCGCAATC GCCGCGACGG GCCGGGGCCA
TGGACGTTGC ACAGCAAGAT TACCGTCTTG GGAACAGGCA TGCTACTGAT AGTCGGATTC
CTCGCTGTTC TTATGGCGGA ATGGAGCAAT CCCGCCACGC TTGGCGCAAT GCCCCTTGGC
GATAAAATCC TGAATGGTGC CTTCCAGTCC GTCACGACCC GCACGACAGG ATTCAATGCC
TTGGATATTG GAGCACTTCA GGAAGAAACA CTGCTTGTCA CTTATATCCT GATGTTCATT
GGCGGAGGTA GCGCTGGCAC TGCAGGAGGC ATAAAGGTCA CCACTTTCTT CCTCCTTGGG
ATTGTCGTCT GGTCGGAAGC GCGCGGAGAA CGCGACGCAG CTATTTTCGG GCGCCGGATA
GGCCCGGCAA TTGAGCGACA AGCCCTGACG GTTGTATTGC TTTCCACCGC ACTTATCGGT
GTGGGCACTC TGATCATCTT GTCCGCGACA CACCTGCCGC TGCAGGCCGT ACTGTTCGAG
ACGATTTCGG CATTCGCCAC CGTGGGGCTC TCCACAGGTA TCACGGCGCA GCTTGGACCG
ATTGGCCAGG TTGTTCTGAT CATCCTGATG TTCATCGGCA GGGTTGGCAC CATCACCATT
TCTACTGCTC TTGCCATGGG CATGGGCCGA ACAGCTTTCC GCTATCCAGA GGAGCGCCCG
ATCGTTGGCT AG
|
|---|
| Protein sequence | MPLRLTHPAR LVPLVFSAAI VLGTVILMLP IARAGAGSAP FLTALFTSTS AICVTGLIVQ
DTPVYWSSFG QWVILLLFQV GGFGIMSAAT LLGLLVGRGF RLSDRLRTRV ERSHFDLHDA
RSVLRLILLV TIVVEGTLAL LLTLRLHFGH GYDWADAAWH GIFHAVSAFN NAGFSTFSDS
LMGFQNDWLF LVPVMLAIVL SSLGFPVLHE IRNRRDGPGP WTLHSKITVL GTGMLLIVGF
LAVLMAEWSN PATLGAMPLG DKILNGAFQS VTTRTTGFNA LDIGALQEET LLVTYILMFI
GGGSAGTAGG IKVTTFFLLG IVVWSEARGE RDAAIFGRRI GPAIERQALT VVLLSTALIG
VGTLIILSAT HLPLQAVLFE TISAFATVGL STGITAQLGP IGQVVLIILM FIGRVGTITI
STALAMGMGR TAFRYPEERP IVG
|
|---|
| |